DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcp-1 and si:ch211-195h23.3

DIOPT Version :9

Sequence 1:NP_476974.1 Gene:Dcp-1 / 37729 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_021334238.1 Gene:si:ch211-195h23.3 / 100170660 ZFINID:ZDB-GENE-070912-174 Length:1001 Species:Danio rerio


Alignment Length:106 Identity:28/106 - (26%)
Similarity:41/106 - (38%) Gaps:25/106 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPANKFVARMPVERYASEYNMSHKHRGVA-------LIFNHEFFDIPSLKSRTGTNVDAQELKKA 110
            ||.|     :||    ||...||:.:...       |....|:    ||:.:. .|.:.|...:.
Zfish   794 LPGN-----VPV----SEVVHSHQDKKYIETTSKCHLFLEREY----SLRCQP-ENCEVQPKSEI 844

  Fly   111 FENLGFAVSVHKDCK--LRDILKHVGKAAELDHTDNDCLAV 149
            ||:..|..:.|...:  |...:|.||... ||..: ||..|
Zfish   845 FEHNNFGPNFHPSFQVFLSVDVKKVGLTI-LDKAE-DCKEV 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 21/88 (24%)
si:ch211-195h23.3XP_021334238.1 P-loop_NTPase 51..307 CDD:328724
GBP_C 315..602 CDD:293879
coiled coil 573..584 CDD:293879
coiled coil 593..602 CDD:293879
FIIND 645..885 CDD:316110 28/106 (26%)
CARD_ASC_NALP1 910..991 CDD:260039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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