DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33846 and H1f4

DIOPT Version :10

Sequence 1:NP_001027354.1 Gene:His1:CG33846 / 3772702 FlyBaseID:FBgn0053846 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_056602.1 Gene:H1f4 / 50709 MGIID:1931527 Length:219 Species:Mus musculus


Alignment Length:261 Identity:103/261 - (39%)
Similarity:128/261 - (49%) Gaps:48/261 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            ||::|.|..|:     ||..||..|:|||..:||...:|.|.    ||..:::..::...|||.|
Mouse     1 MSETAPAAPAA-----PAPAEKTPVKKKARKAAGGAKRKTSG----PPVSELITKAVAASKERSG 56

  Fly    66 SSLLAIKKYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.|. |  |.:|....||..|||.|..|.|:||||.||||||||:   ||....:|
Mouse    57 VSLAALKKALAAAGY--DVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLN---KKAASGEA 116

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKT 194
            |.|              :|:.|.:..|...||| ||||.....||.|.:..|..:|||       
Mouse   117 KPK--------------AKRAGAAKAKKPAGAA-KKPKKAAGTATAKKSTKKTPKKAK------- 159

  Fly   195 GIIKSKPAATKAKVTAAKPKAVVAKASKAKPAVSAKPK-KTVKKASVSATAKKPKA---KTTAAK 255
                 ||||......|..||.  |||:|||.|..:..| ||||..:......||||   |.||||
Mouse   160 -----KPAAAAGAKKAKSPKK--AKATKAKKAPKSPAKAKTVKPKAAKPKTSKPKAAKPKKTAAK 217

  Fly   256 K 256
            |
Mouse   218 K 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33846NP_001027354.1 H15 43..130 CDD:238028 37/87 (43%)
H1f4NP_056602.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 19/48 (40%)
Linker_histone 38..105 CDD:459846 31/68 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..219 64/159 (40%)

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