Protein Alignment wmd and AT1G15470

DIOPT Version :10

• Sequence 1: NP_611804.1
• Gene: wmd / 37727
• FlyBaseID: FBgn0034876
• Length: 328
• Species: Drosophila melanogaster
• Sequence 2: NP_563978.1
• Gene: AT1G15470 / 838117
• AraportID: AT1G15470
• Length: 333
• Species: Arabidopsis thaliana
• Alignment Length: 318
• Identity: 149/318 - (46%)
• Similarity: 205/318 - (64%)
• Gaps: 22/318 - (6%)

  Fly    10 PLTCSGHTRPVVHLDFSDICDAGYFLISACKDGSPMLRHGDTGDWVGTFEGHKGAVWNATLNRNA 74
            ||.|.||:||||.:.:|.:...|:|||||.||.:||||:|:||||:|||||||||||:.:|::||
plant     4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68

  Fly    75 TLAASGAADFTGKVWNAVTGAEIHSFQHKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQP 139
            ..|||.:||||.|:|||:||.|:|||:|||||::.||..|:..::||..||::|:|:|.:|:|.|
plant    69 IRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPP 133

  Fly   140 EEYAGHTGAIKRALFCRGDKCIISAAEDK-TVRLWDRMTGIEVQRLQFNSNPNSLEISSDNHILT 203
            :|.....|:|:...:...|..|:|:..|. .:||||..:...|..|:..|...|.|:|.|...:|
plant   134 KEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYIT 198

  Fly   204 ISHGSSISFWEIDTLKKLKEVKVPTNVASASLHPDKH--VFVCGGEDFKMYKFDYITGNEIESFK 266
            .:.|||:.||:......||...:|.||.||||.| ||  .|:.||||..:::||:.||.||...|
plant   199 TADGSSVKFWDAKNFGLLKSYDMPCNVESASLEP-KHGNTFIAGGEDMWVHRFDFQTGEEIGCNK 262

  Fly   267 GHFGPVHSVKFSPDGELYASGSEDGTLRLWQTTVGKTYGLWKCTEPADLGNSISSPRE 324
            ||.||||.|:::|.||.|.|||||||:|:|  .||                |::.|.|
plant   263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIW--VVG----------------SVNHPEE 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
wmd	NP_611804.1	WD40	<7..299	CDD:441893	144/291 (49%)
		WD40 repeat	25..60	CDD:293791	21/34 (62%)
		WD40 repeat	66..101	CDD:293791	20/34 (59%)
		WD40 repeat	108..144	CDD:293791	14/35 (40%)
		WD40 repeat	150..186	CDD:293791	10/36 (28%)
		WD40 repeat	190..225	CDD:293791	12/34 (35%)
		WD40 repeat	231..266	CDD:293791	18/36 (50%)
		WD40 repeat	272..308	CDD:293791	18/35 (51%)
AT1G15470	NP_563978.1	WD40	<8..292	CDD:441893	140/284 (49%)
		WD40 repeat	15..54	CDD:293791	22/38 (58%)
		WD40 repeat	101..138	CDD:293791	14/36 (39%)
		WD40 repeat	143..180	CDD:293791	10/36 (28%)
		WD40 repeat	186..220	CDD:293791	12/33 (36%)
		WD40 repeat	225..262	CDD:293791	19/37 (51%)