DRSC/TRiP Functional Genomics Resources

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Protein Alignment Menl-2 and me3

DIOPT Version :9

Sequence 1:NP_001027424.2 Gene:Menl-2 / 3772692 FlyBaseID:FBgn0029153 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001082825.1 Gene:me3 / 492719 ZFINID:ZDB-GENE-041111-294 Length:603 Species:Danio rerio


Alignment Length:545 Identity:230/545 - (42%)
Similarity:342/545 - (62%) Gaps:1/545 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WHVVMNGKYNKGLAFTIKERQRLGIMGLMPCSVRSMDDQMNAALANFEARPTDIARFTYLSAVHH 103
            :.:..|...|||:|||::||.:|||.||:|....|.|.|:...:.::|.|...:.::..|..:..
Zfish    50 YDITRNPHLNKGMAFTLEERLQLGIHGLLPPCFLSQDVQVLRVMKSYETRSNPLDKYILLMTLQD 114

  Fly   104 RHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQAISLFISIHDKGHIRDLMHNWVDEGV 168
            |:.:|:||.:..:||:.:|||||||||.....|||.|::...|||:|||||||..::::|.:|.:
Zfish   115 RNEKLFYRVLTSDIEEFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDKGHIATMLNSWPEEDI 179

  Fly   169 KAICVTDGGRVLGLGDMGANAMGISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVG 233
            |||.||||.|:|||||:|...|||.:||:.||||.|.:||...:||.||||||||.||.||||:|
Zfish   180 KAIVVTDGERILGLGDLGGYGMGIPVGKLALYTACGGVPPQQCLPVLLDVGTDNQTLLDDPLYIG 244

  Fly   234 ARIPRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDDIQGTGA 298
            .:..||:|.|||:|:||||::....:|.|..|.|||||..||.:.|.||:.:||.||||||||.:
Zfish   245 LKHKRVRGKEYDDLIDEFMQAVTDKYGMNCLIQFEDFANSNAFRILNKYRNRYCTFNDDIQGTAS 309

  Fly   299 TGLAAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEVRGIPAEEATKNIYLMDVNGIL 363
            ..:|..:...:||..||.|..|:|.|||.||||||::|.|.:...|||..||.:.|:::|..|::
Zfish   310 VAVAGILAALKITKNKLSDHKFVFQGAGEAALGIAHLLIMAMAKEGIPHAEAAQRIWMVDSKGLI 374

  Fly   364 TPESPNPPEMGKIFIKSMEPMKDMMAVLKKLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFP 428
            .....:.....:.|......:|.:..|::.:||:.::|...:||.|.|:::|.||.|:|||.:|.
Zfish   375 VKGRSHLNHEKEEFAHDHPHIKTLEEVVETIKPTAIIGVAAIGGAFTEKIIKNMAANNERPIIFA 439

  Fly   429 LSNPTANSECTAEQAFTHTEGRVLFGSGSPFPPVVI-NGKRYRPAQANNCLTFPGIALAAITAKA 492
            |||||:.:||||||.:|.||||.:|.|||||..|.: :|:.:.|.|.||...|||:||..|....
Zfish   440 LSNPTSKAECTAEQCYTLTEGRGIFASGSPFKKVTLADGRSFYPGQGNNAYVFPGVALGVIACGV 504

  Fly   493 RYLPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQYLIDNDLSNVYPKPDD 557
            |::.:::|...:..::....:|.|.||.|:||:|....|:|.:.|.:..:.....:::.||:|.|
Zfish   505 RHISDDIFLTTAEAISEMVTEEHLAEGRLYPPLKTIREVSFKIAVKIVDHAYKQGIASWYPEPKD 569

  Fly   558 ICEFVKRSLYKFDYRNSLPTTWDYP 582
            ...|:...:|..||.:....::.:|
Zfish   570 KEAFILSHVYNSDYDSFTLDSYSWP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-2NP_001027424.2 PLN03129 8..573 CDD:215594 229/534 (43%)
malic 102..283 CDD:278802 97/180 (54%)
NADB_Rossmann 293..567 CDD:304358 101/274 (37%)
me3NP_001082825.1 PLN03129 47..587 CDD:215594 229/536 (43%)
malic 113..294 CDD:278802 97/180 (54%)
NAD_bind_1_malic_enz 304..580 CDD:133454 101/275 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595264
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.710

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