DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-2 and CG7848

DIOPT Version :9

Sequence 1:NP_001027424.2 Gene:Menl-2 / 3772692 FlyBaseID:FBgn0029153 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_611127.1 Gene:CG7848 / 36839 FlyBaseID:FBgn0034127 Length:633 Species:Drosophila melanogaster


Alignment Length:537 Identity:167/537 - (31%)
Similarity:286/537 - (53%) Gaps:1/537 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WHVVMNGKYNKGLAFTIKERQRLGIMGLMPCSVRSMDDQMNAALANFEARPTDIARFTYLSAVHH 103
            | ::....||||||||:.||:.|.|.||:|.:||::|:|........|:...::.::.||:.:..
  Fly    74 W-MLNQSNYNKGLAFTLNERRVLSIHGLLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSR 137

  Fly   104 RHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQAISLFISIHDKGHIRDLMHNWVDEGV 168
            |:|||:|..:..|.::.:|:.......|::..:.:.......|:|.|.|.||:..::.||....|
  Fly   138 RNRRLFYYLLLSNPDRFVPMTDASGSIDLLMVHRMIHSMGQGLYICIKDLGHVSQILSNWPFRCV 202

  Fly   169 KAICVTDGGRVLGLGDMGANAMGISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVG 233
            :.:.|::|..||.:||:|.:.|.|....:......|.|.|:..:.|.|||||:|:.||.||:|.|
  Fly   203 RCLLVSNGASVLSVGDLGVDEMPILFSNLHQNVVYGGIHPAYCLAVMLDVGTNNEELLNDPMYTG 267

  Fly   234 ARIPRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDDIQGTGA 298
            .|..|.....||:|.:||..|.::.:|....|..:||....|.|.||.|:.:.|..:.|.|...|
  Fly   268 LRERRCSEKLYDQLFEEFTLSVMQQYGPRALILCKDFEAQKAKKQLELYRERQCIVDVDFQCFAA 332

  Fly   299 TGLAAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEVRGIPAEEATKNIYLMDVNGIL 363
            ..||..|...|:........||||.||.:..:|:|.:..:.|:..|:...:|.:.|:..|.||::
  Fly   333 VALAGVIVCNRLKRVFFSSNVFLFYGAEAINIGMARLCMVLLKREGLIEMKAREKIWFFDANGLV 397

  Fly   364 TPESPNPPEMGKIFIKSMEPMKDMMAVLKKLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFP 428
            .....:.||....|....:|:.|::..:::|||::|||.:.:...|..:||:.|.|:.::|.:|.
  Fly   398 VLGRKDIPEELLEFANQRDPILDLVEAIQELKPNILVGGSSLPNTFTPDVLRAMEKSADQPVIFA 462

  Fly   429 LSNPTANSECTAEQAFTHTEGRVLFGSGSPFPPVVINGKRYRPAQANNCLTFPGIALAAITAKAR 493
            ||.|...:||:||.||::|:|..:|.|||..||:....|.|:|....:.....||:...:.|...
  Fly   463 LSRPLEQTECSAEDAFSYTKGHCIFISGSKLPPLKYANKWYQPGHCTSSYLVAGISCGVMLAGFT 527

  Fly   494 YLPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQYLIDNDLSNVYPKPDDI 558
            .:|:|.|.|.:..||.......|::..::||::....::..:..|:..|.....|:.:||:|::.
  Fly   528 NIPDEAFCVAAERLASLVWPCDLEKRNVYPPMRKIQCISLQIAEAIFSYAFGRGLATLYPQPENP 592

  Fly   559 CEFVKRSLYKFDYRNSL 575
            .|::|.|:|..:||.::
  Fly   593 MEYIKNSMYNPEYRMNI 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-2NP_001027424.2 PLN03129 8..573 CDD:215594 166/533 (31%)
malic 102..283 CDD:278802 58/180 (32%)
NADB_Rossmann 293..567 CDD:304358 80/273 (29%)
CG7848NP_611127.1 PLN03129 81..606 CDD:215594 164/524 (31%)
malic 138..317 CDD:278802 58/178 (33%)
NAD_bind_1_malic_enz 327..603 CDD:133454 81/275 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469230
Domainoid 1 1.000 155 1.000 Domainoid score I893
eggNOG 1 0.900 - - E1_COG0281
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
87.890

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