DRSC/TRiP Functional Genomics Resources

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Protein Alignment Menl-2 and men-1

DIOPT Version :10

Sequence 1:NP_001027424.2 Gene:Menl-2 / 3772692 FlyBaseID:FBgn0029153 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_496968.1 Gene:men-1 / 175079 WormBaseID:WBGene00012983 Length:620 Species:Caenorhabditis elegans


Alignment Length:600 Identity:233/600 - (38%)
Similarity:361/600 - (60%) Gaps:15/600 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RRLHPLLRLAS---RPLLSSSRRFSVYDDEMEQITRPDWH---VVMNGKYNKGLAFTIKERQRLG 62
            |||....|..|   .|.||..:..:::.....:.|.|...   ::.:...|||:||::.|||.||
 Worm    11 RRLSTSTRCLSDKNEPDLSDPKTLALHKLYRPERTTPQKRGIDLLKSPGLNKGMAFSLHERQYLG 75

  Fly    63 IMGLMPCSVRSMDDQMNAALANFEARPTDIARFTYLSAVHHRHRRLYYRFIKENIEKSLPIVYTP 127
            :.||:|.:..:.:.|....:.....:|.::|::..|.::..|:.:||||.:.:|:::.:||||||
 Worm    76 VHGLLPPAFMTEEQQAYRIITKLRQQPDNLAKYIQLDSLQDRNEKLYYRVLCDNVKELMPIVYTP 140

  Fly   128 TVGDVVATYGLNFQQAISLFISIHDK--GHIRDLMHNWVDEGVKAICVTDGGRVLGLGDMGANAM 190
            |||.....:|..::....|:|:|:|.  ..|..::.||..|.|:||.:|||.|:|||||:|...:
 Worm   141 TVGQACQHFGFIYRNPKGLYITINDNSISKIHQILANWPTENVRAIVITDGERILGLGDLGTYGI 205

  Fly   191 GISLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARIPRVKGPEYDELVDEFMESA 255
            ||.:||:.||.||..|.|...:||.|||||||..||.||.|.|.|..||:|||||.|||.||::|
 Worm   206 GIPVGKLALYVALAGIRPEWCLPVILDVGTDNSELLNDPFYTGLRRKRVRGPEYDTLVDNFMKAA 270

  Fly   256 VKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDDIQGTGATGLAAFINVERITGRKLEDTVF 320
            .|.||.:|.|.||||...||.:.|::|:.:||.||||||||.|..:|..:...|||.:||.....
 Worm   271 TKRFGRDTLIQFEDFGNQNAYRLLDRYKGEYCMFNDDIQGTAAVVVAGLLASTRITKKKLSQERI 335

  Fly   321 LFVGAGSAALGIANMLAMELEVRGIPAEEATKNIYLMDVNGIL-TPESPNPPEMGKIFIKSMEPM 384
            :|:|||.||.|:|.|...::...|:..|||...||::|:.|:: |..|.:..|....|.|.:...
 Worm   336 VFLGAGGAATGVAEMCVRQMMDEGLSEEEACGRIYMVDIEGLITTSRSKSLGERHVKFAKDLPDT 400

  Fly   385 KDMMAVLKKLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFPLSNPTANSECTAEQAFTHTEG 449
            |:::.|:|.:||..|:||:.|.|.|.|:::|.||:.:.||.:|.|||||:.:|||||.|:..|.|
 Worm   401 KNLLEVVKTVKPGALIGASTVAGAFTEDIIKEMARLNPRPIIFALSNPTSKAECTAETAYRCTNG 465

  Fly   450 RVLFGSGSPFPPVVINGKRYRPAQANNCLTFPGIALAAITAKARYLPNEVFSVVSHELARNTPQE 514
            .|||.|||||..|.:|||.|:|.|.||...|||:||.|:..:.:.:|:::|.:.:..:|....::
 Worm   466 AVLFASGSPFENVEMNGKLYKPGQGNNAYIFPGVALGAVLFRTKNIPDKLFLLAARMVAEAVSEK 530

  Fly   515 LLDE-GTLFPPIKDAHNVAFNVGVAMTQYLIDNDLSNVYPKPDDICEFVKRSLYKFDYRNSLPTT 578
            .|:. ..::|.:||...::..:.|.:.:|...:||:.::|||||:..|::::||..:|...:..|
 Worm   531 SLNTYSRVYPRLKDIRELSVKIAVEVGEYCYRHDLATLHPKPDDMEMFIRQNLYSVEYDELINKT 595

  Fly   579 WDYPVEP-----PTP 588
            :::|.:.     |.|
 Worm   596 YEWPAKDSKHGFPVP 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-2NP_001027424.2 PLN03129 8..573 CDD:215594 226/574 (39%)
men-1NP_496968.1 PLN03129 46..592 CDD:215594 220/545 (40%)

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