DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-2 and LOC101882012

DIOPT Version :9

Sequence 1:NP_001027424.2 Gene:Menl-2 / 3772692 FlyBaseID:FBgn0029153 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_005174595.1 Gene:LOC101882012 / 101882012 -ID:- Length:363 Species:Danio rerio


Alignment Length:348 Identity:122/348 - (35%)
Similarity:197/348 - (56%) Gaps:1/348 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 IPRVKGPEYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDDIQGTGATG 300
            :|:......:|::.......|..:|....|.|||||..||.:.|.||:.||..||||||||.:..
Zfish     5 VPQQPASCSEEIILFINAFVVNRYGMKCLIQFEDFANINAFRLLSKYRNKYLTFNDDIQGTASVA 69

  Fly   301 LAAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEVRGIPAEEATKNIYLMDVNGILTP 365
            :|..:...|||..|:.|...:|.|||.||:||..::.|.:|..|:|.|:..|.|:::|..|::..
Zfish    70 VAGLLAALRITKSKMCDHTIVFQGAGEAAMGIGELIVMAMEKEGLPREQCIKKIWMVDSKGLIVK 134

  Fly   366 ESPNPPEMGKIFIKSMEPMKDMMAVLKKLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFPLS 430
            ...:.....:.|......||.:..|:|:|||:.::|...:.|.|.||::|:||..::.|.:|.||
Zfish   135 GRDHLTHEKERFAHEHAQMKKLEDVVKELKPTAIIGVAAIAGAFTEEIIKSMASFNKNPIIFALS 199

  Fly   431 NPTANSECTAEQAFTHTEGRVLFGSGSPFPPVVI-NGKRYRPAQANNCLTFPGIALAAITAKARY 494
            |||:.:||||||.:|.||||.:|.|||||.||.: :|:::.|.|.||...|||:.|.....:.|:
Zfish   200 NPTSKAECTAEQCYTLTEGRGIFASGSPFDPVTLPDGRKFYPGQGNNSYVFPGVGLGVTACEMRH 264

  Fly   495 LPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQYLIDNDLSNVYPKPDDIC 559
            :|.:||.|.:..:|.....:.|.||.|:||:.....|:..:.|.:.:|...:.::.::|:|.|..
Zfish   265 IPEDVFLVTAEAIAELVTDKDLAEGRLYPPLSSIREVSIKLAVKIVEYAYKHKMATLHPEPQDKD 329

  Fly   560 EFVKRSLYKFDYRNSLPTTWDYP 582
            .|::..:|..||:.....::.:|
Zfish   330 AFIRSLIYSTDYQEFAVDSYSWP 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-2NP_001027424.2 PLN03129 8..573 CDD:215594 121/337 (36%)
malic 102..283 CDD:278802 14/46 (30%)
NADB_Rossmann 293..567 CDD:304358 97/274 (35%)
LOC101882012XP_005174595.1 malic <7..52 CDD:278802 13/44 (30%)
NAD_bind_1_malic_enz 62..339 CDD:133454 98/276 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.