DRSC/TRiP Functional Genomics Resources

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Protein Alignment ste24c and Oma1

DIOPT Version :10

Sequence 1:NP_001027433.1 Gene:ste24c / 3772676 FlyBaseID:FBgn0050462 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001100139.1 Gene:Oma1 / 298282 RGDID:1304821 Length:504 Species:Rattus norvegicus


Alignment Length:267 Identity:52/267 - (19%)
Similarity:89/267 - (33%) Gaps:98/267 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 VLPEGTALYMEVKRV------CD--------------VVGFPMKRVFIIKTRTMQYSNAYFYGSC 266
            :|||....|:.||:|      |:              ||..|....|::..              
  Rat   231 LLPEEDPRYLTVKKVVYHLTQCNQDVPGVSEINWVVHVVHSPKVNAFVLPN-------------- 281

  Fly   267 CLKRIVIFDTLLLNKGKEPNEIHPYEVGRGLTNIQVAGVVCHELGHWKHGH-FYKATIIMKIHFF 330
              .::.:| |.|||   ...::|           |::.::.||:.|...|| ..||:::..:.| 
  Rat   282 --GQVFVF-TGLLN---SVTDMH-----------QLSFLLGHEIAHAVLGHAAEKASLVHLLDF- 328

  Fly   331 ITMGLFGLFFHSPQLYMAVGFEPGVMPIIVGFIIVLKFALTPYLTLANVLMLW------------ 383
                 .|:.|                       :.:.:|:.|..:|| ||..|            
  Rat   329 -----LGMIF-----------------------LTMIWAICPRDSLA-VLGQWIQSKLQEYMFDR 364

  Fly   384 -NLRRFEYAADKFAHRMGYSIQLRMALVKIYADHMSFPVYDQCYAR---WHHTHPTILQRLAYQQ 444
             ..|..|..|||...::.....:.:....::...|.|......|.:   |..|||:...|..|..
  Rat   365 PYSRTLEAEADKIGLQLAAKACVDVRASSVFWQQMEFSESLHGYPKLPEWLSTHPSHGNRAEYLD 429

  Fly   445 KLDVKAM 451
            :|..:|:
  Rat   430 RLIPQAL 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ste24cNP_001027433.1 M48A_Zmpste24p_like 28..445 CDD:320702 50/259 (19%)
Oma1NP_001100139.1 Cardiolipin-binding. /evidence=ECO:0000250|UniProtKB:Q9D8H7 127..146
Stress-sensor region. /evidence=ECO:0000250|UniProtKB:Q9D8H7 144..174
M48C_Oma1_like 242..435 CDD:320690 47/253 (19%)
Blue background indicates that the domain is not in the aligned region.

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