DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ste24c and fce-1

DIOPT Version :9

Sequence 1:NP_001027433.1 Gene:ste24c / 3772676 FlyBaseID:FBgn0050462 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_492582.1 Gene:fce-1 / 172820 WormBaseID:WBGene00001405 Length:442 Species:Caenorhabditis elegans


Alignment Length:455 Identity:125/455 - (27%)
Similarity:215/455 - (47%) Gaps:66/455 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IWEMILTKRQQLVCLNAIMVPEELRGIIPPEIYHRARIYELHKTELQIWKYLIDLIITLCELILG 92
            :|:..:|.||.....||:..|.|::.:|..|.|.:||.|::.......:....:.::...:||.|
 Worm    19 LWDQYITFRQYKAHKNAVKRPNEVKELIGEEDYKKARDYKIDNHLFGFFHSWFNQLLLTAQLIGG 83

  Fly    93 FYPFLWSLSAKTLQKITSQEIWITLIFVFYLTIYICIRFLPVLIYDKCLLELRYGMSGKFPWYLY 157
            :|||||               :.|..:..::.:::.|..:...|.|             .||.||
 Worm    84 YYPFLW---------------YATASYPLHVAVFLSINSIIETIID-------------LPWDLY 120

  Fly   158 C-------------CIGAMSI--LLSQLVLFPLAAAIVFSVKFI----GYYFFLWFWLFWATFTL 203
            .             .||...:  :...||.|.|...||:.:::|    |.|||::.|||.:...|
 Worm   121 STFIIEDAHGFNKQTIGFYFVDKIKKMLVGFALTMPIVYGIEWIIVNGGPYFFVYIWLFVSVVVL 185

  Fly   204 LLVFFLPYCCIPCIGRQVVLPEGTALYMEVKRVCDVVGFPMKRVFIIK-TRTMQYSNAYFYGSCC 267
            ||:...|....|...:...||:|. |..:::::...:.:|:..::::. ::...:||||.||...
 Worm   186 LLMTIYPTFIAPLFDKYFPLPDGD-LKTKIEQLAASLSYPLTELYVVNGSKRSAHSNAYMYGFWK 249

  Fly   268 LKRIVIFDTLLLNKGKEPNEIHPYEVG-------------RGLTNIQVAGVVCHELGHWKHGHFY 319
            .||||::||||  .|.|..::|...|.             ||:.|.:|..|:.||||||...|..
 Worm   250 NKRIVLYDTLL--SGAEKEKVHELYVAAGEKIEETENDKKRGMNNDEVVAVLGHELGHWALWHTL 312

  Fly   320 KATIIMKIHFFITMGLFGLFFHSPQLYMAVGFEPGVMPIIVGFIIVLKFALTPYLTLANVLMLWN 384
            ...:|.:::.|.:..:||.|:....||...|:..  .|.::|.:::.:|.|..|..||::.|:.:
 Worm   313 INLVITEVNLFFSFAVFGYFYKWEALYQGFGYHD--TPPVIGMMLIFQFVLALYNQLASIGMVIH 375

  Fly   385 LRRFEYAADKFAHRMGYSIQLRMALVKIYADHMSFPVYDQCYARWHHTHPTILQRLAYQQKLDVK 449
            .|..|:.||:||..:|:...|..||.|:..|::|.|:.|..|:...||||.:::|:|..:....|
 Worm   376 SRSAEFGADEFAANLGHGENLIGALTKLGVDNLSMPINDSLYSWCTHTHPPVVERVAAVRAFQAK 440

  Fly   450  449
             Worm   441  440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ste24cNP_001027433.1 Peptidase_M48_N 37..215 CDD:293100 47/196 (24%)
HtpX 131..452 CDD:223575 101/352 (29%)
Peptidase_M48 229..441 CDD:299867 69/225 (31%)
fce-1NP_492582.1 Peptidase_M48_N 28..201 CDD:293100 48/200 (24%)
HtpX 75..440 CDD:223575 110/397 (28%)
Peptidase_M48 204..436 CDD:279743 73/236 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159920
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0501
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61664
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10120
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.