DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbx and bbx

DIOPT Version :9

Sequence 1:NP_001027087.1 Gene:bbx / 3772670 FlyBaseID:FBgn0024251 Length:769 Species:Drosophila melanogaster
Sequence 2:XP_009303743.1 Gene:bbx / 100005540 -ID:- Length:899 Species:Danio rerio


Alignment Length:580 Identity:143/580 - (24%)
Similarity:228/580 - (39%) Gaps:169/580 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 DLDEEEDDEEEAEIQVQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEPRQLQQDET 287
            |..|||::|:|.|::.: ||.         .||..|........:.:.::||             
Zfish    38 DFSEEEEEEDEEELEKE-PVL---------CAESSVQEGECGGMEDDSEEYS------------- 79

  Fly   288 ADNTRPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCFTDLAQQ 352
                 .|..|||||||||:||||||.:|::.:..|:||..||||.||||.||.:||..:||:|::
Zfish    80 -----SEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKE 139

  Fly   353 NKDAFFNANPNFKWYKLPAPPLRT-----------LATRPSNASAGLLIPSEDQPQQQVPTSLQV 406
            .||||..|||.:||......|:::           :.:.|||.|..   ||..:.|.:..::.|:
Zfish   140 YKDAFMKANPGYKWCPATNKPVKSPSHSVSNSRKKVWSLPSNPSKD---PSVAKKQPKTDSTPQL 201

  Fly   407 QWAERGEMPRAMLRPNYFKLADETQMGELSSLLQVQVQEKDFALQQVLSETSQ------------ 459
            .                |.:||..:||.||.||  ...|.....:::.|.:||            
Zfish   202 N----------------FAMADPNKMGGLSMLL--LAGEHALTAREISSSSSQTGCTDVAKHTGK 248

  Fly   460 ---FLSAHMPAGNTNGNGNKRSLQDNNSSNSSEEEAASGSSPNKKVKSSRSC-KGKIYQ--ELVN 518
               |..|.:.:......|..::.:|.:|....|   |||.|........:|| |..::|  |.::
Zfish   249 SALFQLAEISSSPAQSAGGSKNAEDTSSLTHVE---ASGPSQPSSPDLPKSCVKSPLFQLAEQIS 310

  Fly   519 S------------GQ----------LAAIAKKSKAR-LPPAGNMGG----NFVDIPLDAGPNTPP 556
            |            ||          ||:.|:|.:|| ..|:|....    |..:|          
Zfish   311 SSRSPSASEGRQCGQSALFQLAEMCLASEAEKMEARSSQPSGGSSSLCAQNSTEI---------- 365

  Fly   557 VSPPERQGSSPDSMQKHIRSVSESSSSGFFDLEEKIKELPALSLDAYLQRKRSTKKKKKFSGTK- 620
               |:|: ...::.:..:.:.|.:|:||      .....|..:......:|:..||:.|.|... 
Zfish   366 ---PDRE-EQKETSELPLTTSSSTSTSG------STSSTPTETSPCKTPKKKKKKKENKESDENP 420

  Fly   621 ------KQRNSNSTSGASATSNVAAADAAAKGA---------VPLSSEQHVRIKQQQLQAVGSQR 670
                  |:|.|..:...|.|..:   :|..|||         .|...|....:..:|..:|..:.
Zfish   421 ASPKKMKKRQSPESDLDSVTFTI---EAVVKGAWGSEETPKKKPRPPESESSLTAEQSPSVKKKT 482

  Fly   671 RKARKESITRRDVSAIEQEVASILPLTINGSYYFNQSGAPKAVNAP-----VTSSSASPP 725
            :...|:.:..:| .|:::|                :..|.|..|.|     :|..:...|
Zfish   483 KPKPKKQLKLKD-DAMQEE----------------EEDADKVANKPQDVEMITEEAPMTP 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbxNP_001027087.1 SOX-TCF_HMG-box 296..367 CDD:238684 42/70 (60%)
bbxXP_009303743.1 SOX-TCF_HMG-box 83..154 CDD:238684 30/70 (43%)
DUF2028 199..344 CDD:312980 39/184 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586775
Domainoid 1 1.000 98 1.000 Domainoid score I7140
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009740
OrthoInspector 1 1.000 - - oto41440
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13059
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.030

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