DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG33822 and H1f5

DIOPT Version :10

Sequence 1:NP_001027314.1 Gene:His1:CG33822 / 3772665 FlyBaseID:FBgn0053822 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_064418.1 Gene:H1f5 / 56702 MGIID:1861461 Length:223 Species:Mus musculus


Alignment Length:269 Identity:105/269 - (39%)
Similarity:131/269 - (48%) Gaps:60/269 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            ||::|.|.:|:     ||.|||...:||.:..||...:||:.    ||..:::..::...|||||
Mouse     1 MSETAPAETAA-----PAPVEKSPAKKKTTKKAGAAKRKATG----PPVSELITKAVSASKERGG 56

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  |.:|....||..|||.|..|.|:||||.||||||||:   ||....:|
Mouse    57 VSLPALKKALAAGGY--DVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLN---KKAASGEA 116

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKK- 193
            |.|              :||.|.:..|...||..|||        ||||..|||.|...|.||| 
Mouse   117 KPK--------------AKKTGAAKAKKPAGATPKKP--------KKTAGAKKTVKKTPKKAKKP 159

  Fly   194 --TGIIKSKPAATKAKVTA---------AKPKAVVAKASKAKPAVSAKPKKTVKKASVSATAKKP 247
              .|:.|...:..|||..|         ||||||.:||||.|   ..|||        :|..|..
Mouse   160 AAAGVKKVAKSPKKAKAAAKPKKAAKSPAKPKAVKSKASKPK---VTKPK--------TAKPKAA 213

  Fly   248 KAKTTAAKK 256
            |||...:||
Mouse   214 KAKKAVSKK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33822NP_001027314.1 H15 43..130 CDD:238028 38/87 (44%)
H1f5NP_064418.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 21/63 (33%)
Linker_histone 38..105 CDD:459846 32/68 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..223 67/168 (40%)

Return to query results.
Submit another query.