DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33822 and hil-6

DIOPT Version :10

Sequence 1:NP_001027314.1 Gene:His1:CG33822 / 3772665 FlyBaseID:FBgn0053822 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_503554.1 Gene:hil-6 / 186584 WormBaseID:WBGene00001857 Length:190 Species:Caenorhabditis elegans


Alignment Length:207 Identity:84/207 - (40%)
Similarity:105/207 - (50%) Gaps:25/207 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |||.|||  .:|....|.         ||..:..||..|.....:|||...||.|:|.:||||.|
 Worm     1 MSDVAVA--ETPAVKTPT---------KAPKANATKVPKVKTAAAHPPFINMVTAAISSLKERKG 54

  Fly    66 SSLLAIKKYITATYKCDAQ--KLAPFIKKYLKSAVVNGKLIQTKGKGASGSF----KLSASAKKE 124
            ||.:||.|||||.||...|  |:...::..||..|.:..|:||.|.||:|.|    |.:|:|||.
 Worm    55 SSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVGTGATGRFRVAEKTAATAKKP 119

  Fly   125 KDPKAKS--KVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAK 187
            ...||.:  ||    ||...||..:||.|...||........||.|||  |||..::....:||.
 Worm   120 TVKKAATGEKV----KKTVVKKTVAKKTGDKVKKAKSPKKIAKPAAKK--ATKSPSKKVAPKKAA 178

  Fly   188 AKDAKKTGIIKS 199
            ||.||||..:|:
 Worm   179 AKPAKKTAALKA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33822NP_001027314.1 H15 43..130 CDD:238028 42/92 (46%)
hil-6NP_503554.1 Linker_histone 35..106 CDD:459846 35/70 (50%)

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