DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33822 and H1f0

DIOPT Version :10

Sequence 1:NP_001027314.1 Gene:His1:CG33822 / 3772665 FlyBaseID:FBgn0053822 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_032223.2 Gene:H1f0 / 14958 MGIID:95893 Length:194 Species:Mus musculus


Alignment Length:252 Identity:88/252 - (34%)
Similarity:114/252 - (45%) Gaps:71/252 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGGSSLLAIK 72
            ::::|.|.|                  .:||.:..:..||....|:.|:|:..|.|.|||..:|:
Mouse     5 STSAPAAKP------------------KRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQ 51

  Fly    73 KYITATYK----CDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKV 133
            |||.:.||    .|:|     ||..:|..|..|.|.||||.||||||:|:    |..:||.....
Mouse    52 KYIKSHYKVGENADSQ-----IKLSIKRLVTTGVLKQTKGVGASGSFRLA----KGDEPKRSVAF 107

  Fly   134 LSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIK 198
            ...:|:|  ||||:.|.....||.|..|..|||||                 ...|.|||     
Mouse   108 KKTKKEV--KKVATPKKAAKPKKAASKAPSKKPKA-----------------TPVKKAKK----- 148

  Fly   199 SKPAATKAKVTAAKPKAVVAKASKAKPAVSAKPKKTVKKASVSATAKKPKAKTTAAK 255
             |||||..|  |.|||.|     |.||..::||||        |...|||||::|.:
Mouse   149 -KPAATPKK--AKKPKVV-----KVKPVKASKPKK--------AKTVKPKAKSSAKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33822NP_001027314.1 H15 43..130 CDD:238028 38/90 (42%)
H1f0NP_032223.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 7/40 (18%)
Linker_histone 25..93 CDD:459846 32/72 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..194 56/148 (38%)

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