DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7215 and Nedd8

DIOPT Version :10

Sequence 1:NP_650680.1 Gene:CG7215 / 3772662 FlyBaseID:FBgn0038571 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_609919.1 Gene:Nedd8 / 35151 FlyBaseID:FBgn0032725 Length:84 Species:Drosophila melanogaster


Alignment Length:85 Identity:25/85 - (29%)
Similarity:48/85 - (56%) Gaps:9/85 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYPNIKEG 65
            |.|.:|.|.||:..|::.||..:..:|.::|.:..|....|:|:..|:.:|:::|.|.| .::.|
  Fly     1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADY-KVQGG 64

  Fly    66 TKLNLV--------VIKPCL 77
            :.|:||        ::.||:
  Fly    65 SVLHLVLALRGGDSILTPCV 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7215NP_650680.1 Ubl1_cv_Nsp3_N-like 1..72 CDD:475130 23/78 (29%)
Tugs 87..121 CDD:465528
Nedd8NP_609919.1 Ubl_NEDD8 3..76 CDD:340504 22/73 (30%)
Blue background indicates that the domain is not in the aligned region.

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