DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7215 and Rad23a

DIOPT Version :10

Sequence 1:NP_650680.1 Gene:CG7215 / 3772662 FlyBaseID:FBgn0038571 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_001365823.1 Gene:Rad23a / 19358 MGIID:105126 Length:367 Species:Mus musculus


Alignment Length:74 Identity:25/74 - (33%)
Similarity:39/74 - (52%) Gaps:7/74 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISA---TNQKLLLLGRPLNNEQTIASYPNIKE 64
            ||:|.|:.:...|.:.|..|:..:|.:||||....|   ..|||:..|:.|:::..|..| :|.|
Mouse     5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIKEY-HIDE 68

  Fly    65 GTKLNLVVI 73
               .|.||:
Mouse    69 ---KNFVVV 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7215NP_650680.1 Ubl1_cv_Nsp3_N-like 1..72 CDD:475130 23/71 (32%)
Tugs 87..121 CDD:465528
Rad23aNP_001365823.1 rad23 3..365 CDD:273167 25/74 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..227
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.