DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33722 and ubx4

DIOPT Version :10

Sequence 1:NP_001027152.1 Gene:CG33722 / 3772658 FlyBaseID:FBgn0064126 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_596591.1 Gene:ubx4 / 2540575 PomBaseID:SPBC21C3.11 Length:425 Species:Schizosaccharomyces pombe


Alignment Length:470 Identity:88/470 - (18%)
Similarity:174/470 - (37%) Gaps:101/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RQNVNVTANMTLLEILETACFKHGYDAEEHCLKFH-NKVVGLTQQFRFSGLPNNCVLEMEQTEKR 77
            |..|.::.:.||.|::.::..:.|:....:....| :|.|..:...|.||:.|...|.::::...
pombe    12 RVPVKLSPSSTLQEVILSSYKQLGFSDWHNLELLHGDKKVDTSLLLRLSGIINGAKLIVKESATN 76

  Fly    78 RT----------LSNVLVCVQLNDGSRQQGDFSPNDTIWLVVEK---LCE-THV---------KA 119
            ::          ...:.|.:||...:|...:.|...:|..::|:   |.: :||         :.
pombe    77 QSGKSSSSISPQSKKIKVALQLPGAARIIDEASSETSIKQLLERHSLLTKVSHVLINGRNFKSEE 141

  Fly   120 YESPVIIYMRSEVIGHEQMRQTTLKSLGILEGRAMMRLIDKKPEDLKTQANVYKAPAVKPRVDND 184
            :::|:::|                   ||.||..::||.     .:|.|.::....|...:..|.
pombe   142 FDNPLLLY-------------------GIREGSILIRLF-----PIKAQQSIVSEQAPVSQTFNG 182

  Fly   185 DQPSTSRSAMAAGGSGGGGGFALTSNMIKNLKRTAPEEKASGSEPAKPLGESNQEQQPQPEPPKY 249
            |......:.                  :.:::....::....|.|..|: ::::..:|.|.|...
pombe   183 DVKEKKNAD------------------LMDIESENKKDDIVESFPKYPV-DAHKLLEPLPTPIPS 228

  Fly   250 DWGNGSGYLMNHPPEQKQAEN-EVEENPGRAPPVVKIIGPRQAVLFSLDESKKNANDLPDSFFDL 313
            .....|.| .|.|.:....|: ....|..:...|::    :.||..:...|.|:......||..:
pombe   229 LPSTPSSY-QNLPSQSLTGESLPTVSNQEKDEGVIE----KVAVNNTPSVSSKSPFPKKKSFSSM 288

  Fly   314 TVNDLKMVLRDLKRTSSGDDDAPLLTAKLRELERQKAMLAK-LNQY---------------KDCV 362
                |..|.:: |..::|.|...|...| .:||..:::|.| .||.               ...:
pombe   289 ----LAQVKKE-KAENNGSDGYDLQPTK-SQLELYQSILRKRANQVSSTSLTKSSSPKPLPSSAI 347

  Fly   363 LRIQFPDRFVLQGMFKPHEPLSKVEDFVREFLVQPGE--QFHLFTIPPKKVLPSGETLLELNFVP 425
            ::..|.:...:...|...:.:..:..||...| .|.|  .|.| |....:.||:  |.|.:..:.
pombe   348 VKFDFGNGKSIVHEFSKDDNIETLRAFVASHL-SPEESTSFQL-TFSNYEALPT--TGLIVEHIG 408

  Fly   426 NAIVHFGFIKDSLNA 440
            .|:|....|.|.:.|
pombe   409 RAVVRVHTISDPVYA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33722NP_001027152.1 Ubl_ASPSCR1_like 5..73 CDD:340522 14/59 (24%)
UBX1_UBXN9 81..157 CDD:340595 16/88 (18%)
UBX2_UBXN9 361..433 CDD:340535 16/73 (22%)
ubx4NP_596591.1 TUG-UBL1 7..68 CDD:463285 13/55 (24%)
Ubl1_cv_Nsp3_N-like 92..160 CDD:475130 16/86 (19%)
UBX 348..415 CDD:340466 16/70 (23%)

Return to query results.
Submit another query.