DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and MCM6

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_001331629.1 Gene:MCM6 / 834492 AraportID:AT5G44635 Length:857 Species:Arabidopsis thaliana


Alignment Length:303 Identity:63/303 - (20%)
Similarity:111/303 - (36%) Gaps:72/303 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   863 MILLASI--VSIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRFL-----GPHEYGLQPTFN 920
            ::||..:  .:.|...:|..|::||:...|...::.|.....:.||.:     .....||..|..
plant   369 LMLLGGVHKTTHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVA 433

  Fly   921 ALPTRFNW-IVASPLLLAQQGVYYAGDWNRLS-KDQGCQLEKCIENGAVPVPQLHIDQPLKAAVW 983
            ..|....: |.|..|:||..|:....:::::. ||| ..:.:.:|...:.:.:..|...|.|   
plant   434 KEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQ-VAIHEAMEQQTISITKAGIQATLNA--- 494

  Fly   984 TYWQPNNSTNQTLALAKLCPIFG-------------LP---------IYMGAQASNSLWN----- 1021
                      :|..||...|:.|             ||         :|:.....:.:.:     
plant   495 ----------RTSILAAANPVGGRYDKSKPLKYNVNLPPAILSRFDLVYVMIDDPDEVTDYHIAH 549

  Fly  1022 ---SIIQKHNAEGQIVVNDGLSIPEDDMRMLIHLLHQRKT---TLTDGAQHMLQKYYVISRKERP 1080
               .:.|||.|        .|| ||.....|...:...||   .|:..|:.:|.:.||..|:...
plant   550 HIVRVHQKHEA--------ALS-PEFTTVQLKRYIAYAKTLKPKLSPEARKLLVESYVALRRGDT 605

  Fly  1081 NVFSSKTYIV-------LKQLAECFAKLALRLEVLESDVCVAI 1116
            ...:...|.:       |.:|:|..|:..|.:.|..|.|.:|:
plant   606 TPGTRVAYRMTVRQLEALIRLSEAIARSHLEILVKPSHVLLAV 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 62/301 (21%)
MCM_lid 1044..1116 CDD:465534 18/81 (22%)
MCM6NP_001331629.1 MCM_N 17..113 CDD:464206
MCM 116..656 CDD:475121 63/303 (21%)
MCM6_C 711..856 CDD:465688
Blue background indicates that the domain is not in the aligned region.

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