DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and mcm6l

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_001020704.1 Gene:mcm6l / 564982 ZFINID:ZDB-GENE-050913-141 Length:824 Species:Danio rerio


Alignment Length:391 Identity:70/391 - (17%)
Similarity:128/391 - (32%) Gaps:135/391 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   871 SIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRFL--------------------GPHEYGL 915
            ::|...:|..|::||:...|...::.|..|...|||.:                    ..||:.:
Zfish   374 TMEGTSLRGDINVCIVGDPSTSKSQFLKHVEDFAPRAVYTSGKASSAAGLTAAVVKDEESHEFVI 438

  Fly   916 QPTFNALPTRFNWIVASPLLLAQQGVYYAGDWNRLS-KDQGCQLEKCIENGAVPVPQLHIDQPLK 979
            :              |..|:||..||....:::::. ||| ..:.:.:|...:.:.:..:...|.
Zfish   439 E--------------AGALMLADNGVCCIDEFDKMDLKDQ-VAIHEAMEQQTISITKAGVKATLN 488

  Fly   980 AAVWTYWQPNNSTNQTLALAKLCPIFGLPIYMGAQASNSLWNSIIQKHNAEGQIVVNDGLSIPED 1044
            |             :|..||...||.|                   ::|....:..|..:|.|..
Zfish   489 A-------------RTSILAAANPIDG-------------------RYNRAKSLKQNVNMSAPIM 521

  Fly  1045 DMRMLIHLLHQRKTTLTDGA---------------------QHMLQKYYVISRKERPNV-FSSKT 1087
            ....|..:|......:||.|                     ...:|:|.:.:|:.:|.: ..::.
Zfish   522 SRFDLFFILVDECNEVTDYAIARRIVDLHARNVESVERVYSTDEIQRYILFARQFQPKITVEAQE 586

  Fly  1088 YIV--LKQLAE----CFAKLALRLEV--LES----DVCVAIFHCEHFVQGIFGAKENQAPPAVFN 1140
            ::|  .|:|.:    ...|.|.|:.|  |||    ...:|..:|...||    .|..:....:.|
Zfish   587 FVVDQYKRLRQRDGGGTTKSAWRITVRQLESMLRLSEGMARLYCSDEVQ----PKHVKEAFRLLN 647

  Fly  1141 FNVISCIDPYMNKFTRWLLQYLNSYEDE--------------------ELGMHADKRRRTDSWDM 1185
            .::|....|.:|         .:...||                    ::..||.:...||..:.
Zfish   648 KSIIRVDSPDIN---------FDQEHDEDNINDQNELFGKETEGQNGGDVNGHAVEDMETDQTEK 703

  Fly  1186 P 1186
            |
Zfish   704 P 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 54/299 (18%)
MCM_lid 1044..1116 CDD:465534 19/105 (18%)
mcm6lNP_001020704.1 MCM_N 21..109 CDD:464206
MCM 116..651 CDD:475121 60/327 (18%)
MCM6_C 712..820 CDD:465688
Blue background indicates that the domain is not in the aligned region.

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