DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and Mcm5

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster


Alignment Length:210 Identity:39/210 - (18%)
Similarity:81/210 - (38%) Gaps:38/210 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   878 RAPISLCIIATDSLMANRLLNKVGQLAPRFL-----GPHEYGLQPTFNALPTRFNWIV-ASPLLL 936
            |..|::.::.......::||..|.::||..:     |....||..:....|...|::: ...::|
  Fly   369 RGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVL 433

  Fly   937 AQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHIDQPLKAAVWTYWQPNNSTNQTLALAKL 1001
            |..||....:::::.:|....:.:.:|...:.:.:..|...|           ||....||.|. 
  Fly   434 ADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL-----------NSRCSVLAAAN- 486

  Fly  1002 CPIFGLPIYMGAQASNSLWNSIIQKHNAEGQIVVNDGLSIPEDDMRMLIHLLHQRKTTLTDGAQH 1066
             .|||            .|:....:.|.:....:     :...||..::..:|.....:| .|:|
  Fly   487 -SIFG------------RWDDTKGEENIDFMPTI-----LSRFDMIFIVKDIHDESRDIT-LAKH 532

  Fly  1067 MLQKYYVISRKERPN 1081
            :: ..::.|.|..|:
  Fly   533 II-NVHLSSNKSAPS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 39/210 (19%)
MCM_lid 1044..1116 CDD:465534 9/38 (24%)
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206
MCM 128..648 CDD:214631 39/210 (19%)
Blue background indicates that the domain is not in the aligned region.

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