DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and Mcm2

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster


Alignment Length:523 Identity:106/523 - (20%)
Similarity:190/523 - (36%) Gaps:139/523 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   675 VGTTNMDIFTSSPPPIQHMSSSRLPSSISGPTQLSHTLSSPPVENQHQQHLWES-------CIHQ 732
            |.:.|.:|...|.|..|    |..|.||:    :..||    ..|..:..|.||       .|.:
  Fly   325 VQSQNTEIKPGSCPECQ----STGPFSIN----MEQTL----YRNYQKITLQESPGRIPAGRIPR 377

  Fly   733 DEDLMYSRPLLDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVVADEHGEENAYLAKDAGPP-- 795
            .:|::....|.|    :.:|         ..|:|.....:.|.         :..|..|.|.|  
  Fly   378 SKDVILLADLCD----QCKP---------GDELEVTGIYTNNY---------DGSLNTDQGFPVF 420

  Fly   796 ----LERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMD 856
                :..|::.:...|..|.....|:    ::|:||.       .|...|..:.|.::......|
  Fly   421 ATVIIANHVVVKDSKQVVQSLTDEDI----ATIQKLS-------KDPRIVERVVASMAPSIYGHD 474

  Fly   857 CFVYLKMILLASIVSIES------DEVRAPISLCIIATDSLMANRLLNKVGQLAPRFL-----GP 910
               |:|..|..::...||      .:||..|:|.|........::.|....::|||.:     |.
  Fly   475 ---YIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGA 536

  Fly   911 HEYGLQPTFNALPTRFNW-IVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHI 974
            ...||.......|....| :.|..|:||.|||....::::::......:.:.:|..::.:.:..|
  Fly   537 SAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGI 601

  Fly   975 DQPLKAAVWTYWQPNNSTNQTLALAKLCPIFGLPIY---MGAQASNSLWNSIIQKHNAEGQIVVN 1036
            ...|:|             :...:|...||.|.  |   |....:.:|...|:.:.:.  ..||.
  Fly   602 VTSLQA-------------RCTVIAAANPIGGR--YDPSMTFSENVNLSEPILSRFDV--LCVVK 649

  Fly  1037 DGLSIPEDDMRMLIHLLHQ-----------------RKTTLTDGAQHMLQKYYVISRKE-RPNVF 1083
            |... |..|.::...::|.                 :..|:.:..|.:|::|.|.:::. ||.:.
  Fly   650 DEFD-PMQDQQLAKFVVHSHMKHHPSEEEQPELEEPQLKTVDEIPQDLLRQYIVYAKENIRPKLT 713

  Fly  1084 S------SKTYIVLKQ--------------------LAECFAKLALRLEVLESDVCVAI-FHCEH 1121
            :      :|.|..|:|                    ::|..|::.||..|:|:||.:|| ...|.
  Fly   714 NIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLES 778

  Fly  1122 FVQ 1124
            |::
  Fly   779 FIE 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 62/312 (20%)
MCM_lid 1044..1116 CDD:465534 21/115 (18%)
Mcm2NP_477121.1 MCM2_N 59..166 CDD:403724
MCM_N 182..271 CDD:464206
MCM 276..780 CDD:214631 105/520 (20%)
Blue background indicates that the domain is not in the aligned region.

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