DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mei-218 and Mcm2

DIOPT Version :9

Sequence 1:NP_001027068.1 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster


Alignment Length:523 Identity:106/523 - (20%)
Similarity:190/523 - (36%) Gaps:139/523 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   675 VGTTNMDIFTSSPPPIQHMSSSRLPSSISGPTQLSHTLSSPPVENQHQQHLWES-------CIHQ 732
            |.:.|.:|...|.|..|    |..|.||:    :..||    ..|..:..|.||       .|.:
  Fly   325 VQSQNTEIKPGSCPECQ----STGPFSIN----MEQTL----YRNYQKITLQESPGRIPAGRIPR 377

  Fly   733 DEDLMYSRPLLDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVVADEHGEENAYLAKDAGPP-- 795
            .:|::....|.|    :.:|         ..|:|.....:.|.         :..|..|.|.|  
  Fly   378 SKDVILLADLCD----QCKP---------GDELEVTGIYTNNY---------DGSLNTDQGFPVF 420

  Fly   796 ----LERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMD 856
                :..|::.:...|..|.....|:    ::|:||.       .|...|..:.|.::......|
  Fly   421 ATVIIANHVVVKDSKQVVQSLTDEDI----ATIQKLS-------KDPRIVERVVASMAPSIYGHD 474

  Fly   857 CFVYLKMILLASIVSIES------DEVRAPISLCIIATDSLMANRLLNKVGQLAPRFL-----GP 910
               |:|..|..::...||      .:||..|:|.|........::.|....::|||.:     |.
  Fly   475 ---YIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGA 536

  Fly   911 HEYGLQPTFNALPTRFNW-IVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHI 974
            ...||.......|....| :.|..|:||.|||....::::::......:.:.:|..::.:.:..|
  Fly   537 SAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGI 601

  Fly   975 DQPLKAAVWTYWQPNNSTNQTLALAKLCPIFGLPIY---MGAQASNSLWNSIIQKHNAEGQIVVN 1036
            ...|:|             :...:|...||.|.  |   |....:.:|...|:.:.:.  ..||.
  Fly   602 VTSLQA-------------RCTVIAAANPIGGR--YDPSMTFSENVNLSEPILSRFDV--LCVVK 649

  Fly  1037 DGLSIPEDDMRMLIHLLHQ-----------------RKTTLTDGAQHMLQKYYVISRKE-RPNVF 1083
            |... |..|.::...::|.                 :..|:.:..|.:|::|.|.:::. ||.:.
  Fly   650 DEFD-PMQDQQLAKFVVHSHMKHHPSEEEQPELEEPQLKTVDEIPQDLLRQYIVYAKENIRPKLT 713

  Fly  1084 S------SKTYIVLKQ--------------------LAECFAKLALRLEVLESDVCVAI-FHCEH 1121
            :      :|.|..|:|                    ::|..|::.||..|:|:||.:|| ...|.
  Fly   714 NIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLES 778

  Fly  1122 FVQ 1124
            |::
  Fly   779 FIE 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_001027068.1 PTZ00112 122..>417 CDD:240274
MCM <1023..1116 CDD:278895 26/136 (19%)
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227
MCM_N 184..270 CDD:379644
MCM 276..780 CDD:214631 105/520 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.