DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mei-218 and Mcm7

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster


Alignment Length:743 Identity:133/743 - (17%)
Similarity:230/743 - (30%) Gaps:275/743 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 EFTESLLEG---------SSGKTPEKEVVP-YQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSN 538
            ||.|||.|.         |.......|::| |:||          |:||...:            
  Fly    57 EFNESLAEAVVDNCRRYTSIFSDVIAELLPSYKQQ----------EVHAKDAL------------ 99

  Fly   539 AKEFHPTGESHLTHKVSRLSQRRCRQRFTRSLHAKKNNPREQLPNPDSAPEPILEYTSEIDDQP- 602
                    :.::.|::...|:.|              ||.||....:|.|..::: ..|:..:| 
  Fly   100 --------DVYIEHRLMMESRTR--------------NPMEQRDERNSFPSELMK-RFEVGFKPL 141

  Fly   603 ----------------------------C---PPRQTVDT------------PIEAI-------V 617
                                        |   .|...|.|            |:.::       .
  Fly   142 STEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPVNSLSFTPVHDC 206

  Fly   618 PPAMIEVSATGNLPPVFYFDQQSG-------IIWSNSSPQIPVEIQSNSVSQSVFRLASLPCTGV 675
            |.....|:..|..   .|...:..       :.....|.|:||        ..:.|..::.|.|.
  Fly   207 PSDDCRVNKAGGR---LYLQTRGSKFVKFQEVKMQEHSDQVPV--------GHIPRSMTIMCRGE 260

  Fly   676 GTTNMDIFTSSPPPIQH--MSSSRLPSSISGPTQLSHTLSSPPVENQHQQHLWESCIHQDEDLMY 738
                   .|....|..|  :|...||...:|..|:...|.|......|:    ..||::::::. 
  Fly   261 -------VTRMAQPGDHIVVSGVFLPLMRTGFAQMIQGLLSETFLQAHR----IICINKNDEIS- 313

  Fly   739 SRPLLDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVVADEHGEENAYLAKDAGPPLERHMIFR 803
                 |.|.|.| ||          |:|        ::..|:..|.   ||....|.:..|:   
  Fly   314 -----DKDAELT-PE----------ELE--------ELAQDDFYER---LATSLAPEIYGHL--- 348

  Fly   804 APSQHGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMDCFVYLKMILLAS 868
                               .:||                ||                  ::||..
  Fly   349 -------------------DVKK----------------AL------------------LLLLVG 360

  Fly   869 IVSIESD--EVRAPISLCIIATDSLMANRLLNKVGQLAPRF-----LGPHEYGLQPTFNALP-TR 925
            .|....|  ::|..|::|::....:..::||..:.:||.|.     .|....||.......| |.
  Fly   361 GVDKRPDGMKIRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTG 425

  Fly   926 FNWIVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHIDQPLKAAV-------- 982
            ...:....|:||.|||....::::::......:.:.:|...:.:.:..|...|.|.|        
  Fly   426 EMTLEGGALVLADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANP 490

  Fly   983 -WTYWQPNNSTNQTLAL-AKLCPIFGLPIYMGAQASNSLW---------NSI--------IQKHN 1028
             :..:.|..:..|.:.| |.|...|.|           ||         |.:        :..|:
  Fly   491 AFGRYNPRRTVEQNIQLPAALLSRFDL-----------LWLIQDKPDRDNDLRLAKHITYVHSHS 544

  Fly  1029 AEGQIVVNDGLSIPEDDMRMLIHLLHQRKTTLTDGAQHMLQKYYVISRKERPN-----VFSSKTY 1088
            .:....|.   ::..:.||..|:|..::..|:.|.....:...||..|:|..|     ..|::..
  Fly   545 KQPPTRVK---ALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELRREARNQKDMTFTSARNL 606

  Fly  1089 IVLKQLAECFAKLALRLEVLESDVCVAI 1116
            :.:.:|:...|:|.|...|.:.||..|:
  Fly   607 LGILRLSTALARLRLSDSVEKDDVAEAL 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 59/293 (20%)
MCM_lid 1044..1116 CDD:465534 19/76 (25%)
Mcm7NP_523984.1 MCM_N 10..103 CDD:464206 15/75 (20%)
MCM 145..641 CDD:475121 107/610 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.