DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and dpa

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster


Alignment Length:889 Identity:167/889 - (18%)
Similarity:272/889 - (30%) Gaps:318/889 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 SPAKRASV-----TNNSSAPIR-IAPRQ-QTTQSSGPS-VVHNEDEDVMPPTPNQSERRQRRFPR 467
            |||:..||     ...:..|.| ||.:. :|....||. .|...|...:|||...:.......|.
  Fly     3 SPARSPSVGGATPKQGARTPTRGIASQDVETPMRMGPGRAVRPSDNISLPPTSPGNISLPATSPA 67

  Fly   468 RNHNPRMVR-SLQAVSREFTESLLEGSSGKTPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAM 531
            |.....|.. .|.:.....|.|.:  .|.:||...:       :...:::.|:|.....:|::|:
  Fly    68 RGLGANMSEIDLSSPLNYGTPSSM--GSIRTPRSGI-------RGTPLRARPDIRTDKRIRQVAI 123

  Fly   532 GSVLNSNAKEFHPTGESHLTHKVSRLSQ-------------RRCRQRFTR--------------- 568
            |   ..:..|..|...|..|..||..||             .:|:.:|..               
  Fly   124 G---GGSGLEPIPEKGSETTDPVSESSQAPQLVVWGTNVVVSQCKSKFKSFIMRFIDPSAEQDEI 185

  Fly   569 SLHAKKNNP--REQLPNPDSAPEPILEYTS---EIDDQP------CPPRQTV---DTPIEAI--- 616
            |.:...|.|  .::|....:..||.|....   :..||.      |.|::.:   |..|..:   
  Fly   186 SENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEMFFE 250

  Fly   617 -VPPAMIE---------VSATGNLPPVFYFDQQ-----SGII--WSNSSPQI------------- 651
             .|.|::|         ...|.|:..:...|..     ||::  .||..|::             
  Fly   251 RYPAALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNICSFS 315

  Fly   652 -PVEIQSNSVSQSVFRLASLPCTGVGTT-------NMDIFT--------SSPPPIQHMSSSRLP- 699
             .||:....::|...      ||...|.       |...||        .||   ..|::.:.| 
  Fly   316 TTVEVDRGRINQPTL------CTNCNTNHCFRLIHNRSEFTDKQLVKLQESP---DDMAAGQTPH 371

  Fly   700 ----------------------SSISGPTQLSHTLSSPPVENQHQQHLWESCIHQDEDLMYSRPL 742
                                  :.|...|.|.....|..|::.::.|:         |:::.|.:
  Fly   372 NVLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSVKSVYKTHV---------DVVHFRKV 427

  Fly   743 LDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVVADEHGEENAYLAKDAGPPLERHMIFRAPSQ 807
                                         ...::..||.|:::.:      || ||..:.:..::
  Fly   428 -----------------------------DNKRLYEDEEGKDHIF------PP-ERVELLQLLAK 456

  Fly   808 HGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMDCFVYLKMILLASI--- 869
                  |||:                 |...:...|.|...:.|        ..|.|||...   
  Fly   457 ------KPDI-----------------YDRLARAIAPSIYENDD--------IKKGILLQLFGGT 490

  Fly   870 ----VSIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRF-----LGPHEYGLQPTFNALP-T 924
                .::.....|:.|.|.:........:::|..|..|.||.     .|....||.......| |
  Fly   491 KKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPET 555

  Fly   925 RFNWIVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHIDQPLKAAVWTYWQPN 989
            |...:....|:||..||....::::::......|.:.:|                          
  Fly   556 RQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVME-------------------------- 594

  Fly   990 NSTNQTLALAK---LCPIFG-LPIYMGAQASNSLWN---SIIQKHNAEGQIVVNDGLSI----PE 1043
               .|||::||   :|.:.. ..|...|..:.|.||   :||........::....|..    |:
  Fly   595 ---QQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQ 656

  Fly  1044 D---DMRMLIHLL-------HQRK---------------------TTLTDGAQHMLQKYYVISRK 1077
            |   |.|:..||:       |:.:                     .||:|.||..|.:.||..||
  Fly   657 DEIFDKRLASHLVSLYYVTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRK 721

  Fly  1078 ---------ERPNVFSSKTYIVLKQLAECFAKLALRLEVLESDV 1112
                     ..|....|     |.:|:|..||:.|..:|...||
  Fly   722 VGAGRGQISAYPRQLES-----LIRLSEAHAKVRLSNQVELLDV 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274 3/5 (60%)
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 67/315 (21%)
MCM_lid 1044..1116 CDD:465534 27/109 (25%)
dpaNP_477185.1 PHA03307 2..>150 CDD:223039 39/158 (25%)
MCM_N 165..267 CDD:464206 17/101 (17%)
MCM 270..772 CDD:214631 110/610 (18%)
Blue background indicates that the domain is not in the aligned region.

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