DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and Mcmdc2

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_808390.2 Gene:Mcmdc2 / 240697 MGIID:3045334 Length:681 Species:Mus musculus


Alignment Length:532 Identity:127/532 - (23%)
Similarity:211/532 - (39%) Gaps:104/532 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   702 ISGPTQLSHTLSSPPVENQHQQHLWESCIHQDEDLMYSRPLLDMDQEETQPEQQDQEWQWESEIE 766
            :.|.|:      |..|.|.....|..|.:.:|...   |.|.|....|....:....:|.:|:.:
Mouse   169 VPGATE------SATVRNDFLCSLCSSSLQEDRKF---RVLGDKQIVEIITTKMFHAFQGDSKNQ 224

  Fly   767 PPSFQSENQVVADEHGEE----NAYLAKDAGPP-----------LERHMIFRAPSQHGQEYPKPD 816
            |..|||....:.||...:    |.|  |..|.|           :|.:.|    :.|..:.|.. 
Mouse   225 PFRFQSLGIFLRDELVNKMKIGNEY--KIIGIPVCVKTSQTALCVEANNI----TPHTAKVPLG- 282

  Fly   817 LNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMDCFVYLKMILLASIVSIE--SDEVRA 879
               :..:.::|..|.||  |.:.|...|:...:...|....:..||:.||.|:|...  :.|...
Mouse   283 ---ISDNFRRLLSLTSS--SCWKFTAMLANVFASQIVAPGTYNLLKLCLLMSLVQTRDCNRERED 342

  Fly   880 PISLCIIATDSLMANRLLNKVGQLAPRFLGPHEYGLQ--------PTF--NALPTRFNWIVASPL 934
            .:.:.:|.:|:|:.:||||....|..|       |::        ||.  |...|....|.|...
Mouse   343 CLDILVITSDTLLVDRLLNFSMNLVSR-------GIRHPVCTEVFPTVSRNKYGTGAVSIQAGSA 400

  Fly   935 LLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPV--PQL----HIDQ----PLKAAVWTYWQPN 989
            |||:.|:.:.||.....||:..||:..:|:.:|.|  |..    ..||    |::.:.|::...:
Mouse   401 LLAKGGICFIGDLTSHKKDKLEQLQSALESRSVTVFIPGKKFGDDFDQQMTFPIQCSFWSFVDMD 465

  Fly   990 NSTNQ--------------TLALAKLCPIFGLPIYMG-AQASNSLWNSIIQKHNAEGQIVVNDGL 1039
            :|:.:              :|..|.|...|||.|... |...:.|..::  :|..: :.|..:||
Mouse   466 SSSRRNVQKTSTLIGQMDCSLIPANLAEAFGLLINCSEASPCHPLLPTV--QHTLK-KAVEPEGL 527

  Fly  1040 ------SIPEDDMRMLIHLLHQRKTTLTDGAQHMLQKYYVISRKER-PNVFSSK------TYIVL 1091
                  ....:|...|:..........:..|:.|:..||:.||:.| .::..||      .|:| 
Mouse   528 LYLASKQFTTEDFEKLLAFAKSLNMEFSLEAERMIHGYYLASRRIRTDSIHGSKLSASALKYLV- 591

  Fly  1092 KQLAECFAKLALRLEVLESDVCVAIFHCEHFVQGIFGAKE-NQAPPAVFNFNV-----ISCIDPY 1150
             .|:|..|:|:||..||..|..:|....|..:...:||.. ..||.|:|.|.:     :...|.|
Mouse   592 -SLSEAHARLSLRTTVLREDALIAALLLEISLTLRYGATPFCVAPNALFPFELYNEEYLEQRDLY 655

  Fly  1151 MNKFTRWLLQYL 1162
            :.:..:.|.|::
Mouse   656 LTQCQQQLQQFI 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 76/303 (25%)
MCM_lid 1044..1116 CDD:465534 22/78 (28%)
Mcmdc2NP_808390.2 MCM <395..621 CDD:475121 58/230 (25%)
MCM_lid <557..622 CDD:465534 22/66 (33%)
Blue background indicates that the domain is not in the aligned region.

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