DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and mcmdc2

DIOPT Version :9

Sequence 1:NP_001027068.1 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:XP_012820732.2 Gene:mcmdc2 / 105947627 XenbaseID:XB-GENE-1012270 Length:684 Species:Xenopus tropicalis


Alignment Length:429 Identity:94/429 - (21%)
Similarity:170/429 - (39%) Gaps:77/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   793 GPPLERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMDC 857
            ||    |:.....:.:..:|.:...:.:..|.:.||....|  |.:.|...|:...:...:|:..
 Frog   266 GP----HISVCIEANNIHQYIEESPSTISKSFQTLHSATMS--SPWIFTGILANMFASQVIPLGV 324

  Fly   858 FVYLKMILLASIVSI--ESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRFLGPHEYGLQPTFN 920
            ...||:.:|.|:|..  |..:..:.:.|.::.:|:|:.:||:.....|.||  |...|.....|.
 Frog   325 HNTLKLCILLSLVQTCKEEKDNGSFLDLLVVTSDTLIVDRLMRYSICLVPR--GVQHYTSNDLFA 387

  Fly   921 AL-----PTRFNWIVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPV----------- 969
            .:     .|....|.|...|:|..|:.:.||.:...||:...|:..:|:.:..|           
 Frog   388 TVIKDIRGTGTATIQAGSALMANGGICFMGDLSLHKKDKLDHLQSVLESRSTSVFIPGKKYGEDV 452

  Fly   970 -PQLHIDQPLKAAVWTYWQ--PNNSTNQ----------TLALAKLCPIFGLPIYMGAQASNSLWN 1021
             .|:.|  |::.:.|:|..  |....::          ::..:.|...||:.||.         |
 Frog   453 NHQICI--PVQCSFWSYMDSYPKKHVHRDTTFIGQVDLSVVPSNLLDAFGMFIYC---------N 506

  Fly  1022 SIIQKHNAEGQIVVNDGLS---IPE------------DDMRMLIHLLHQRKTTLTDGAQHMLQKY 1071
            .|:  ||.....:|:..|.   .||            .|...||......:..::..:..::..|
 Frog   507 EIL--HNQPPLFLVHHNLQRAVNPETYIYPSSELYTTQDYEKLIAFAKNIQVNISKKSVTLIHGY 569

  Fly  1072 YVISRKERPNVFSS----KTYIVLKQLAECFAKLALRLEVLESDVCVAIFHCE------HFVQGI 1126
            |:.||:.|.:...|    .....|..::|..|||:||.||||.||.||:...|      |.....
 Frog   570 YLASRRVRTDTHGSTMPTSALRHLISMSEAHAKLSLRREVLEEDVLVAVLLFELSLTLKHGSSAF 634

  Fly  1127 FGAKENQAPPAVFNFNVISCIDPYMNKFTRWLLQYLNSY 1165
            :.:.....|..:::.:.:...|.|:.:..:.|||::.:|
 Frog   635 YVSPSALFPVELYDESSLHQRDLYLRETYQQLLQFVFTY 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_001027068.1 PTZ00112 122..>417 CDD:240274
MCM <1023..1116 CDD:278895 30/111 (27%)
mcmdc2XP_012820732.2 Mcm2 46..625 CDD:224162 86/379 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009781
OrthoInspector 1 1.000 - - oto104652
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7620
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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