DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and mcm8

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:XP_002665161.2 Gene:mcm8 / 100333576 ZFINID:ZDB-GENE-120927-1 Length:852 Species:Danio rerio


Alignment Length:818 Identity:147/818 - (17%)
Similarity:278/818 - (33%) Gaps:247/818 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 FTESLLEGSSGKTPEKEVVPYQQQEK--PRQVKSSPEIHASSHMRKLAMGSV------LNSNAKE 541
            |:|..:|.|          ||.::.|  .:...|..:::....:.:  .||:      |.||.:.
Zfish    94 FSEGFVESS----------PYVEKIKVFEQYFTSQIDLYDKDEIER--KGSILVDYKDLLSNKQV 146

  Fly   542 FHPTGESHLTHKVSRLSQR-------RCRQRFTRSL--HAKKNNPREQLPNPDSAPEPILE---- 593
            .|...:  |...:..:.::       ...|..|..|  ||.:...:|:||   :...||:.    
Zfish   147 SHSLPD--LARDLKEMPEKILDCLGVAIHQVLTLDLERHAAELQGQEELP---AGIRPIINIPHI 206

  Fly   594 ----YTSEIDDQPCPPRQTVDTPIE---AIVPPAMIEVSATGNLPPV---FYF------DQQSGI 642
                |..|    |..|.:::...:.   .::...::.||   |:.|:   ..|      |.|| :
Zfish   207 SARLYNYE----PLTPLKSLRANLYGKFVVIRGTVVRVS---NIKPLCMKLAFVCNSCGDTQS-V 263

  Fly   643 IWSNSSPQIPVE-IQSNSVSQSVFRLASLPCTGVGTTNMDIFTSSPPPIQHM------SSSRLPS 700
            ...:....:|.: :||....:|.....|.|.    |..:|..|..   :|.:      .|.|:|.
Zfish   264 TLPDGKYTMPTKCLQSECRGRSFTPNRSSPF----TLTVDWQTIK---VQELMSGDQRESGRIPR 321

  Fly   701 SISGPTQLSHTLSSPPVENQHQQHLWESCIHQDEDLMYSRPLLDMDQEETQPEQQDQEWQWESEI 765
            :|               |.:..|.|.:||:  ..|::....::.:..||.....:..:..:...|
Zfish   322 TI---------------ECELTQDLVDSCV--PGDMVTITGVIKVSNEEGSTRNKKDKCMFLLYI 369

  Fly   766 EPPSFQSENQVVADEHGEENAYLAKDAGPPLERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLHHL 830
            :..|       |::..|:::..:::..|         :.||             |..|||.|:.:
Zfish   370 QANS-------VSNSKGQKSKAVSESEG---------QGPS-------------VEFSIKDLYAI 405

  Fly   831 ISSQYSDYSFVYALSAQISQDCVPMDCFVY--------LKMILLASIVSIESDEVRAPI----SL 883
            ...|..:..|     ..|.....|:   :|        |.:.|.........|:.|.||    .:
Zfish   406 QEIQAQEDLF-----KLIVNSLCPV---IYGHLLVKAGLALALFGGCQKYVDDKNRIPIRGDPHM 462

  Fly   884 CIIATDSLMANRLLNKVGQLAPRFLGPHEYGLQPTFNALPTRFN--------WIVASPLLLAQQG 940
            .|:....|..:::|..|..:|||  |.:..|...|.:.|....:        .:.|..|:|..||
Zfish   463 LIVGDPGLGKSQMLQAVCNVAPR--GVYVCGNTTTTSGLTVSLSRDSGSGDYALEAGALVLGDQG 525

  Fly   941 VYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHIDQPLKA---------AVWTYWQPNNSTNQTL 996
            :....:::::.......|| .:|..::.:.:..|...|.|         .|..::....:.::.|
Zfish   526 ICCIDEFDKMGSQHQALLE-AMEQQSISLAKAGIVCTLPARTSIIAAANPVGGHYNKGKTVSENL 589

  Fly   997 AL-AKLCPIFGLPIYMGAQASNSLWNSIIQKH---------------------NAEGQIVVNDGL 1039
            .: :.|...|.| :::.....|...:.::.:|                     ..|..|.:.:..
Zfish   590 KMGSALLSRFDL-VFILLDTPNEDHDHLLSEHVMAMRAGKSGAVSGAAATRFNTHESSISILEVS 653

  Fly  1040 S------------------IPEDDMRMLI----HLLHQRKTTLTDGAQHMLQKYYVISRKERPNV 1082
            |                  ||...:|..:    |.:|   .||:..|..:||.:|:..||:  |.
Zfish   654 SEKPLADTLKLVPGEAFDPIPHQLLRKYVGYARHYVH---PTLSAEAAQVLQDFYLELRKQ--NQ 713

  Fly  1083 FSSKTYIVLKQ------LAECFAKLALRLEVLESDVCVAIFHCEHFVQGIFGAKENQAPPAVFNF 1141
            .:..|.|..:|      |.|..|::.||.:..:||....:...:|                    
Zfish   714 TADSTPITTRQLESLIRLTEARARVELREKATQSDAEDVVEIMKH-------------------- 758

  Fly  1142 NVISCIDPYMNKFTRWLLQYLNSYEDEELGMHADKRRR 1179
               |..|.|.::|.|.      .::..:||.....|.:
Zfish   759 ---SLTDTYSDEFGRL------DFDRSQLGSGMSNRSK 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 61/324 (19%)
MCM_lid 1044..1116 CDD:465534 22/81 (27%)
mcm8XP_002665161.2 Mcm2 100..844 CDD:440854 145/812 (18%)
Blue background indicates that the domain is not in the aligned region.

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