DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-218 and mcm3l

DIOPT Version :10

Sequence 1:NP_728052.2 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_001164539.1 Gene:mcm3l / 100147915 ZFINID:ZDB-GENE-040121-2 Length:807 Species:Danio rerio


Alignment Length:389 Identity:73/389 - (18%)
Similarity:137/389 - (35%) Gaps:124/389 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   775 QVVADEHGEENAYL-------AKDAGPPLERHMIFRAPSQHGQEYPKPDLNCVPSSIKKLHHLIS 832
            ::|....|::.|.:       :||....|.|.:   |||.||.||.|..:.|             
Zfish   269 EIVPTFSGDDVAKIKKFCKAHSKDVFEQLSRSL---APSIHGHEYIKKAILC------------- 317

  Fly   833 SQYSDYSFVYALSAQISQDCVPMDCFVYLKMILLASIVSIES-DEVRAPISLCIIATDSLMANRL 896
                                          ::|..:..::|: ..:|..|::.:|...|:..::|
Zfish   318 ------------------------------LLLGGNETNLENGTRIRGDINILLIGDPSVAKSQL 352

  Fly   897 LNKVGQLAPRFL-----GPHEYGLQPTFNA-LPTRFNWIVASPLLLAQQGVYYAGDWNRLSKDQG 955
            |..|...|||.:     |....||...... ..|....:.|..::||.:||....:::::|....
Zfish   353 LRYVLFTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDR 417

  Fly   956 CQLEKCIENGAVPVPQLHIDQPLKAAVWTYWQPNNSTNQTLALAKLCPIFG-LPIYMGAQASNSL 1019
            ..:.:.:|.|.|.:.:..|...|.|             :...||...|::| ...|.....:..|
Zfish   418 TAIHEVMEQGRVTISKAGIQARLNA-------------RCSVLAAANPVYGRYDQYKTPMENIGL 469

  Fly  1020 WNSIIQKHNAEGQIVVNDGLSIPEDDMRMLIHLLHQRK-------------------------TT 1059
            .:|::.:.:.  ..:|.|.:. |:.|..:..|:|...:                         ..
Zfish   470 QDSLLSRFDL--LFIVLDQMD-PDSDKEISEHVLRMHRYRAPGEAEGTAMPLGSTVDVFATEDPN 531

  Fly  1060 LTDGAQHMLQKY----YVI--SRKERPNVFSS---KTYI--------VLKQ-----LAECFAKL 1101
            :|:.::..||.|    .|:  .||:|..:.:.   :.||        ||.|     :||.:::|
Zfish   532 ITEASEQELQIYEKKDNVLHGHRKKREKIVTMEFIRKYIHVAKLVKPVLTQEASDYIAEEYSRL 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-218NP_728052.2 PTZ00112 122..>417 CDD:240274
SP1-4_N <152..>287 CDD:425404
MCM 862..1116 CDD:475121 57/295 (19%)
MCM_lid 1044..1116 CDD:465534 19/105 (18%)
mcm3lNP_001164539.1 MCM_N 29..102 CDD:464206
MCM 107..652 CDD:214631 73/389 (19%)
Blue background indicates that the domain is not in the aligned region.

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