DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and MME1

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_013889.1 Gene:MME1 / 855202 SGDID:S000004776 Length:368 Species:Saccharomyces cerevisiae


Alignment Length:364 Identity:86/364 - (23%)
Similarity:138/364 - (37%) Gaps:110/364 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            |.|...|..:....|..||.:|||.|.                           .||      ..
Yeast    57 VVSGGIGGKIGDSAMHSLDTVKTRQQG---------------------------APN------VK 88

  Fly   108 RFSGTIDAFIKISRTEGI-GSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRP--- 168
            ::...|.|:..|...||: ..|:.|....::.:.||..|:|..||            ||:|.   
Yeast    89 KYRNMISAYRTIWLEEGVRRGLYGGYMAAMLGSFPSAAIFFGTYE------------YTKRTMIE 141

  Fly   169 -----DTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ----------RMTHAE 218
                 |||.|           |.||..|..::.....|.|:::|::|.|          ...::.
Yeast   142 DWQINDTITH-----------LSAGFLGDFISSFVYVPSEVLKTRLQLQGRFNNPFFQSGYNYSN 195

  Fly   219 MFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYE-YLKSSFGVV-------EPTFSFSF 275
            :...|:.|::.:|...|:.|...|:.||:|||.:.:..|| :.:.:|.:.       |.:.....
Yeast   196 LRNAIKTVIKEEGFRSLFFGYKATLARDLPFSALQFAFYEKFRQLAFKIEQKDGRDGELSIPNEI 260

  Fly   276 AAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQ------------------VATKSV 322
            ..||.:|.:|..||||.|||||..|         :..||.|                  ..:.|:
Yeast   261 LTGACAGGLAGIITTPMDVVKTRVQ---------TQQPPSQSNKSYSVTHPHVTNGRPAALSNSI 316

  Fly   323 AMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            ::.|.::|:..||...|||:|||....:...:||:..::
Yeast   317 SLSLRTVYQSEGVLGFFSGVGPRFVWTSVQSSIMLLLYQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 25/116 (22%)
Mito_carr 178..265 CDD:395101 22/97 (23%)
Mito_carr 268..371 CDD:395101 31/112 (28%)
MME1NP_013889.1 Mito_carr 51..142 CDD:395101 28/129 (22%)
PTZ00168 55..>283 CDD:185494 68/281 (24%)
Mito_carr 252..363 CDD:395101 31/113 (27%)

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