DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and MRS4

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_012978.1 Gene:MRS4 / 853926 SGDID:S000001760 Length:304 Species:Saccharomyces cerevisiae


Alignment Length:334 Identity:92/334 - (27%)
Similarity:140/334 - (41%) Gaps:61/334 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PL--QQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPA 101
            ||  |.:|.|..|.|..: .|.|:|.:|||:||.              ||            |.|
Yeast    22 PLHSQLLAGAFAGIMEHS-LMFPIDALKTRVQAA--------------GL------------NKA 59

  Fly   102 AAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTR 166
            |:      :|.|....|||..||..:||.|:...::.|.|:..:||..||..|||........|.
Yeast    60 AS------TGMISQISKISTMEGSMALWKGVQSVILGAGPAHAVYFGTYEFCKARLISPEDMQTH 118

  Fly   167 RPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQG 231
            :|...|             |:|....|.|...::|.:.::.::|..  |:..::...:|:.|::|
Yeast   119 QPMKTA-------------LSGTIATIAADALMNPFDTVKQRLQLD--TNLRVWNVTKQIYQNEG 168

  Fly   232 VLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEPTFSFS----FAAGAISGSVAATITTPF 292
            ....:...|.|:..::||:...:..||.....|   .|..|::    ...|.|||:..|.:|||.
Yeast   169 FAAFYYSYPTTLAMNIPFAAFNFMIYESASKFF---NPQNSYNPLIHCLCGGISGATCAALTTPL 230

  Fly   293 DVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMI 357
            |.:||..|:...|  ..|....|...|...|.|  :|..:.|....:.||.||:....||.||..
Yeast   231 DCIKTVLQVRGSE--TVSIEIMKDANTFGRASR--AILEVHGWKGFWRGLKPRIVANIPATAISW 291

  Fly   358 SSFEYGKSF 366
            :::|..|.|
Yeast   292 TAYECAKHF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 39/121 (32%)
Mito_carr 178..265 CDD:395101 16/86 (19%)
Mito_carr 268..371 CDD:395101 33/103 (32%)
MRS4NP_012978.1 PTZ00168 27..252 CDD:185494 72/277 (26%)
Mito_carr 205..304 CDD:395101 32/100 (32%)

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