DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and MRS3

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_012402.1 Gene:MRS3 / 853308 SGDID:S000003669 Length:314 Species:Saccharomyces cerevisiae


Alignment Length:369 Identity:98/369 - (26%)
Similarity:153/369 - (41%) Gaps:70/369 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MAAASSQN----PSKATMTD-PRFRIRPL------QQVASACTGAMVTACFMTPLDVIKTRLQAQ 70
            |...||.|    |..|...| |.:...|.      |.:|.|..|.|..: .|.|:|.:|||:|:.
Yeast     1 MVENSSSNNSTRPIPAIPMDLPDYEALPTHAPLYHQLIAGAFAGIMEHS-VMFPIDALKTRIQSA 64

  Fly    71 QQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPT 135
            ....||.|..|   ..:.|                             ||.:||..:||.|:...
Yeast    65 NAKSLSAKNML---SQISH-----------------------------ISTSEGTLALWKGVQSV 97

  Fly   136 LISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVS 200
            ::.|.|:..:||..||..|....|       ..||..|   ||..   ..::|......:...::
Yeast    98 ILGAGPAHAVYFGTYEFCKKNLID-------SSDTQTH---HPFK---TAISGACATTASDALMN 149

  Fly   201 PVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFG 265
            |.:.|:.::|..  |.|.::.|.:|:.||:|:...:...|.|::.::||:...:..||   ||..
Yeast   150 PFDTIKQRIQLN--TSASVWQTTKQIYQSEGLAAFYYSYPTTLVMNIPFAAFNFVIYE---SSTK 209

  Fly   266 VVEPTFSFS----FAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRL 326
            .:.|:..::    ...|:||||..|.||||.|.:||..||. |.:.:..:...|.......|   
Yeast   210 FLNPSNEYNPLIHCLCGSISGSTCAAITTPLDCIKTVLQIR-GSQTVSLEIMRKADTFSKAA--- 270

  Fly   327 ASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHY 370
            ::||::.|....:.|..||:....||.||..:::|..|.|...|
Yeast   271 SAIYQVYGWKGFWRGWKPRIVANMPATAISWTAYECAKHFLMTY 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 32/125 (26%)
Mito_carr 178..265 CDD:395101 20/86 (23%)
Mito_carr 268..371 CDD:395101 33/107 (31%)
MRS3NP_012402.1 PTZ00168 34..251 CDD:185494 72/268 (27%)
Mito_carr 215..314 CDD:395101 31/102 (30%)

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