DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and HEM25

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_010164.1 Gene:HEM25 / 851439 SGDID:S000002277 Length:307 Species:Saccharomyces cerevisiae


Alignment Length:354 Identity:83/354 - (23%)
Similarity:140/354 - (39%) Gaps:76/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCG 94
            ||:...:.|....:.....|.:.:|..:.|||::|||:|..::|.|       ...|.:      
Yeast     1 MTEQATKPRNSSHLIGGFFGGLTSAVALQPLDLLKTRIQQDKKATL-------WKNLKE------ 52

  Fly    95 PDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKAR--- 156
                              ||:.:::.|    |:|.|.|..::.|||..:.:..:.....|.|   
Yeast    53 ------------------IDSPLQLWR----GTLPSALRTSIGSALYLSCLNLMRSSLAKRRNAV 95

  Fly   157 ---FTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAE 218
               ..|.:..|.:     :..:|. :.....||.|...|.|......|:.:|:.:.:|....::.
Yeast    96 PSLTNDSNIVYNK-----SSSLPR-LTMYENLLTGAFARGLVGYITMPITVIKVRYESTLYNYSS 154

  Fly   219 MFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEP-------------- 269
            :...|..:...:|:.|.:||...|.|||.|::|:|...||..|....:|.|              
Yeast   155 LKEAITHIYTKEGLFGFFRGFGATCLRDAPYAGLYVLLYEKSKQLLPMVLPSRFIHYNPEGGFTT 219

  Fly   270 --TFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRM 332
              :.:.:..:..:|.|:|.|:|.|||.:||..|:| ..||..|.|            ...||.:.
Yeast   220 YTSTTVNTTSAVLSASLATTVTAPFDTIKTRMQLE-PSKFTNSFN------------TFTSIVKN 271

  Fly   333 GGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            ..|..:||||..||.:.|.:..|....:|
Yeast   272 ENVLKLFSGLSMRLARKAFSAGIAWGIYE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 24/125 (19%)
Mito_carr 178..265 CDD:395101 23/86 (27%)
Mito_carr 268..371 CDD:395101 29/110 (26%)
HEM25NP_010164.1 Mito_carr 12..92 CDD:395101 23/114 (20%)
Mito_carr 114..200 CDD:395101 23/86 (27%)
Mito_carr 229..307 CDD:395101 28/85 (33%)

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