DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and ucp1

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_955817.1 Gene:ucp1 / 83908 ZFINID:ZDB-GENE-010503-1 Length:309 Species:Danio rerio


Alignment Length:344 Identity:81/344 - (23%)
Similarity:135/344 - (39%) Gaps:65/344 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHIC 91
            |.:...|...::.|....:||...:||    .|||..|.|||.|.:..::               
Zfish     5 KPSDVPPPLTVKVLSAGTAACIADLVT----FPLDTAKVRLQIQGEKAVT--------------- 50

  Fly    92 PCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKAR 156
                     .||| ..|:.|.......:.||||..||::||...|...:....|....|:..|: 
Zfish    51 ---------GAAK-GIRYKGVFGTISTMMRTEGPRSLYNGLVAGLQRQMAFASIRIGLYDNVKS- 104

  Fly   157 FTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHA---E 218
                  .|||..|.     |:   ..|.:|||.:...:||:...|.::::.:.|:|.....   .
Zfish   105 ------FYTRGKDN-----PN---VAVRILAGCTTGAMAVSMAQPTDVVKVRFQAQMNLQGVGRR 155

  Fly   219 MFGTI---RQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF---GVVEPTFSFSFAA 277
            ..||:   ||:.|.:|:.|||:|..|.|.|:...:......|:.:|.:.   .::.......|.:
Zfish   156 YNGTMQAYRQIFQLEGLRGLWKGTLPNITRNALVNCTELVSYDLIKEAILKHRLLSDNLPCHFVS 220

  Fly   278 GAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGL 342
            ...:|.:...|.:|.|||||.          :.::||.|.::.:..  ..::....|..|.:.|.
Zfish   221 AFGAGFITTVIASPVDVVKTR----------YMNSPPGQYSSSTNC--AWTMLTKEGPTAFYKGF 273

  Fly   343 GPRLFKVAPACAIMISSFE 361
            .|...::.....:|..|||
Zfish   274 VPSFLRLGSWNVVMFVSFE 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 30/119 (25%)
Mito_carr 178..265 CDD:395101 24/95 (25%)
Mito_carr 268..371 CDD:395101 20/94 (21%)
ucp1NP_955817.1 Mito_carr 10..110 CDD:395101 34/135 (25%)
Mito_carr 111..208 CDD:395101 26/104 (25%)
Mito_carr 213..299 CDD:395101 20/92 (22%)

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