DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and AT2G26360

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_180204.2 Gene:AT2G26360 / 817176 AraportID:AT2G26360 Length:387 Species:Arabidopsis thaliana


Alignment Length:375 Identity:89/375 - (23%)
Similarity:143/375 - (38%) Gaps:100/375 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GQFAAASAAMAAASSQNPSKATMTDPRFRI-----RPLQQVASACTGAMVTACFMTPLDVIKTRL 67
            |.|.:.|..:|...::..:|....|...|:     ..|:...:.......:|..|.|:|.:||::
plant    75 GNFTSRSNEIAPLINEAVAKGKNFDTGTRVGLDVGHLLKSALAGGISCAFSAFLMHPVDTVKTQV 139

  Fly    68 QAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKI-SRTEGIGS--LW 129
            ||                                         .|..:|::| |:...||:  |:
plant   140 QA-----------------------------------------STTLSFLEILSKIPEIGARGLY 163

  Fly   130 SGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPL----LAGVS 190
            .|..|.::....|..:....||..|..                  :|...|.|:.:    :|...
plant   164 KGSIPAVVGQFASHGLRTSIYEASKLA------------------LPLVAPTLLDIQVQSIASFI 210

  Fly   191 GRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQS----QGVLGLWRGLPPTILRDVPF-- 249
            |.:|..|...|.|:::.::|      |..|..|.:...|    :|:.||:||...|:||:|||  
plant   211 GTVLGTTLRIPCEVLKQRLQ------ANQFDNIVEATVSTWHQEGLKGLFRGTGVTLLREVPFYV 269

  Fly   250 --SGIYWTCYEYLKSSFG-VVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSD 311
              .|:|....:.::...| .:||.  .:.|.||:||...|.:||||||:||...           
plant   270 AGMGLYNQSKKVVERQLGRELEPW--EAIAVGALSGGFTAVLTTPFDVIKTRMM----------- 321

  Fly   312 NPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            ..|:.|.. |:.|...||....|..|.:.|..||.|..||..|:.::.:|
plant   322 TAPQGVEL-SMLMAAYSILTHEGPLAFYKGAVPRFFWTAPLGALNLAGYE 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 22/122 (18%)
Mito_carr 178..265 CDD:395101 26/98 (27%)
Mito_carr 268..371 CDD:395101 32/94 (34%)
AT2G26360NP_180204.2 PTZ00168 112..354 CDD:185494 75/320 (23%)

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