DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a28

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001072892.1 Gene:slc25a28 / 780354 XenbaseID:XB-GENE-967691 Length:370 Species:Xenopus tropicalis


Alignment Length:384 Identity:101/384 - (26%)
Similarity:157/384 - (40%) Gaps:79/384 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAASAAMAAASSQNPSKATMTDPRFRIRP------LQQVASACTGAMVTACFMTPLDVIKTRLQA 69
            :..|..:..||..|       :|.:...|      ...:|.|..|.| ..|.|.|:|.:|||:|:
 Frog    51 STGSRILELASKDN-------EPEYEALPEGSNVTTHMLAGAVAGVM-EHCLMYPVDCVKTRMQS 107

  Fly    70 QQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSP 134
            .|                       ||        ||.|:...:||..||.||||......||:.
 Frog   108 LQ-----------------------PD--------PAARYRNVMDALSKIVRTEGFWRPLRGLNV 141

  Fly   135 TLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCV 199
            |...|.|:..:||..||:.|...:||     .||....|        :....||....:|....:
 Frog   142 TATGAGPAHALYFACYEKLKKTLSDI-----IRPGGNCH--------IANGAAGCVATLLHDAAM 193

  Fly   200 SPVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF 264
            :|.|:|:.:||.....:.::...||.|.:::|....:|.....:..::||..|::..||:|:...
 Frog   194 NPAEVIKQRMQMYNSPYRKVTDCIRVVWRNEGAGAFYRSYTTQLTMNIPFQAIHFMTYEFLQEHL 258

  Fly   265 G---VVEPTFSFSFAAGAISGSVAATITTPFDVVK----THEQIEFGEKFIFSDNPPKQVATKSV 322
            .   ...||  ....:||.:|:|||..|||.||.|    |.|.:...     |.|....:...:.
 Frog   259 NPHRQYNPT--SHMLSGACAGAVAAAATTPLDVCKTLLNTQESLALN-----SSNISGHITGMAN 316

  Fly   323 AMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQHNRSNQA 381
            |.|  ::|::||:.|.|.|:..|:....|:.||..|.:|     |:.|.:.:.....:|
 Frog   317 AFR--TVYQVGGIAAYFRGVQARVIYQMPSTAIAWSVYE-----FFKYILTKQQEKRRA 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 37/125 (30%)
Mito_carr 178..265 CDD:395101 19/86 (22%)
Mito_carr 268..371 CDD:395101 33/106 (31%)
slc25a28NP_001072892.1 Mito_carr 75..166 CDD:395101 36/122 (30%)
Mito_carr 176..262 CDD:395101 19/85 (22%)
Mito_carr <284..361 CDD:395101 26/88 (30%)

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