DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a20

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_065266.1 Gene:Slc25a20 / 57279 MGIID:1928738 Length:301 Species:Mus musculus


Alignment Length:348 Identity:84/348 - (24%)
Similarity:138/348 - (39%) Gaps:66/348 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCG 94
            |.|....|.|.:.:.:...|.|.......|||.:|.|||.|.                       
Mouse     1 MADEPKPISPFKNLLAGGFGGMCLVFVGHPLDTVKVRLQTQP----------------------- 42

  Fly    95 PDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTD 159
                 |:.:...|.:|||:|.|.|....|||..|:.|::..:|...|...:.|..:...|.    
Mouse    43 -----PSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKK---- 98

  Fly   160 IHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMF-GTI 223
               ...:.|:   .::.:|..|...:|:||    .....::|.|.|:..:|.|..:....: ||:
Mouse    99 ---LQQKSPE---DELSYPQLFTAGMLSGV----FTTGIMTPGERIKCLLQIQASSGENKYSGTL 153

  Fly   224 ---RQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF-----GVVEPTFSFSFAAGAI 280
               :::.|..|:.|.::|...|::||||.||:|:..||:||:.|     .|.:.:......||..
Mouse   154 DCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPEGKSVSDLSVPRILVAGGF 218

  Fly   281 SGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVAT--KSVAMRLASIYRMGGVPAIFSGLG 343
            :|.....:..|.||:|:.          |...||.:...  :.|   |..:.|..||.:::.|..
Mouse   219 AGIFNWAVAIPPDVLKSR----------FQTAPPGKYPNGFRDV---LRELIREEGVTSLYKGFN 270

  Fly   344 PRLFKVAPACAIMISSFEYGKSF 366
            ..:.:..||.|.....||....|
Mouse   271 AVMIRAFPANAACFLGFEIAMKF 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 28/119 (24%)
Mito_carr 178..265 CDD:395101 29/95 (31%)
Mito_carr 268..371 CDD:395101 22/101 (22%)
Slc25a20NP_065266.1 Mito_carr 6..103 CDD:395101 29/131 (22%)
Solcar 1 8..99 29/125 (23%)
Mito_carr 106..198 CDD:395101 28/95 (29%)
Solcar 2 108..196 28/91 (31%)
Mito_carr 205..294 CDD:395101 22/102 (22%)
Solcar 3 207..293 21/98 (21%)

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