DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawn and slc25a38b

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_073809420.1 Gene:slc25a38b / 571961 ZFINID:ZDB-GENE-110214-1 Length:299 Species:Danio rerio


Alignment Length:325 Identity:88/325 - (27%)
Similarity:131/325 - (40%) Gaps:67/325 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            :..:.:|...|..|. |||::|||||..|..:                        :|.|.|   
Zfish    26 MCGSLSGTCSTLLFQ-PLDLVKTRLQTLQNNM------------------------HPGAPK--- 62

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
              .|.|.....:.|||.:..||.|:||:.:..:|...|||..:...|.     ||.....|....
Zfish    63 --VGMITVLFNVIRTEKLLGLWKGVSPSFMRCIPGVGIYFSTFYSLKQ-----HYFQEGSPSAGE 120

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWR 237
                       .:|.|...|.:|...:.|..:|:|:.:|.|..:..:.|.::.|.|::|...|:.
Zfish   121 -----------AVLLGAGARCVAGVAMLPFTVIKTRFESGRYNYISVAGALKSVCQNEGPKALYS 174

  Fly   238 GLPPTILRDVPFSGIYWTCYEYLKS------SFGVVEPTFSFSFAAGAISGSVAATITTPFDVVK 296
            ||..|:|||.||||||...|...|.      |...:.|.  .:|..|.::|.:|:..|.|.||:|
Zfish   175 GLTATLLRDAPFSGIYVMFYSQAKKALPQEISSSSIAPL--VNFGCGVVAGILASLATQPADVIK 237

  Fly   297 THEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            ||.|:.           |......|.|||  .:|...|:...|.|..||..:.....|:..:.:|
Zfish   238 THMQVS-----------PALYPKTSDAMR--HVYVKHGLSGFFRGAVPRSLRRTLMAAMAWTVYE 289

  Fly   362  361
            Zfish   290  289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 30/115 (26%)
Mito_carr 178..265 CDD:395101 29/92 (32%)
Mito_carr 268..371 CDD:395101 26/94 (28%)
slc25a38bXP_073809420.1 None

Return to query results.
Submit another query.