DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a23a

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_068078018.1 Gene:slc25a23a / 561939 ZFINID:ZDB-GENE-121214-154 Length:486 Species:Danio rerio


Alignment Length:337 Identity:78/337 - (23%)
Similarity:141/337 - (41%) Gaps:63/337 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKP 105
            |.:|.|..|: |:.....|||.:|..||...|:                     .|..|.     
Zfish   196 QLMAGAVAGS-VSRTGTAPLDRLKVFLQVHGQS---------------------SDKGNV----- 233

  Fly   106 APRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDT 170
               :|| :.|.:|   ..|:.:||.|....::...|.|.|.|:||||.|......:...|.:   
Zfish   234 ---WSG-LRAMVK---EGGLTALWRGNGINVLKIAPETAIKFLAYEQIKRLMRGSNEGGTLK--- 288

  Fly   171 IAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRM-THAEMFGTIRQVVQSQGVLG 234
             .|:     .|:...|||.:    |.|.:.|:|:::|::..::. .::.:....:|::|.:||..
Zfish   289 -VHE-----RFVAGSLAGAT----AQTIIYPMEVLKTRLTLRKTGQYSSVADCAKQILQKEGVRA 343

  Fly   235 LWRGLPPTILRDVPFSGIYWTCYEYLKSSF------GVVEPTFSFSFAAGAISGSVAATITTPFD 293
            .::|..|.:|..:|::||....||.||:::      |..:|........|.:|.:.....:.|..
Zfish   344 FYKGYLPNMLGIIPYAGIDLAVYETLKNAWLQRHTEGSADPGVLVLVGCGTVSSTCGQLASYPLA 408

  Fly   294 VVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMIS 358
            :::|..|.:...|     ..|:    .|:.....||....||..::.|:.|...||.||.:|...
Zfish   409 LIRTRMQAQASIK-----GAPQ----LSMLTLFRSIVAQEGVVGLYRGIAPNFLKVIPAVSISYV 464

  Fly   359 SFEYGKSFFYHY 370
            .:|:.::..:.:
Zfish   465 VYEHMRALIFRF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 31/117 (26%)
Mito_carr 178..265 CDD:395101 23/93 (25%)
Mito_carr 268..371 CDD:395101 21/103 (20%)
slc25a23aXP_068078018.1 FRQ1 25..150 CDD:444056
PTZ00169 186..454 CDD:240302 72/313 (23%)
Blue background indicates that the domain is not in the aligned region.

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