DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawn and SLC25A38

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_060345.2 Gene:SLC25A38 / 54977 HGNCID:26054 Length:304 Species:Homo sapiens


Alignment Length:323 Identity:87/323 - (26%)
Similarity:141/323 - (43%) Gaps:64/323 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            :..:.:|...|..|. |||::|||||..|.:              ||                ..
Human    32 LCGSISGTCSTLLFQ-PLDLLKTRLQTLQPS--------------DH----------------GS 65

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
            |..|.:...:|:.|||.:..||.|:||:::..:|...|||......|..|..             
Human    66 RRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLR------------- 117

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWR 237
               .||...|..::.||..|.:|..|:||:.:|:|:.:|.:..:..::..:|.:..|:|..||:.
Human   118 ---GHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFS 179

  Fly   238 GLPPTILRDVPFSGIYWTCYEYLKS--SFGVVEPTF--SFSFAAGAISGSVAATITTPFDVVKTH 298
            ||..|:|||.||||||...|...|:  ....|:.|.  ..:|:.|..:|.:|:.:|.|.||:|||
Human   180 GLTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADVIKTH 244

  Fly   299 EQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            .|: :..||            :.:...:..|::..|:...|.|..||..:.....|:..:.:|
Human   245 MQL-YPLKF------------QWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 31/115 (27%)
Mito_carr 178..265 CDD:395101 31/88 (35%)
Mito_carr 268..371 CDD:395101 23/96 (24%)
SLC25A38NP_060345.2 Solcar 1. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 25..114 30/112 (27%)
Mito_carr 26..117 CDD:395101 31/115 (27%)
Mito_carr 120..209 CDD:395101 31/88 (35%)
Solcar 2. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 121..205 30/83 (36%)
Solcar 3. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 215..299 22/93 (24%)
Mito_carr 217..304 CDD:395101 22/91 (24%)

Return to query results.
Submit another query.