DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a39

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_012827167.1 Gene:slc25a39 / 496786 XenbaseID:XB-GENE-969813 Length:412 Species:Xenopus tropicalis


Alignment Length:385 Identity:171/385 - (44%)
Similarity:226/385 - (58%) Gaps:58/385 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AAASSQNPSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQAL---LSNK- 78
            |..||.:|...|         ||||:.::.|||::|:.|:|||||:|.|||||::.|   ||.| 
 Frog    59 AEESSSSPGGIT---------PLQQILASGTGALLTSLFVTPLDVVKIRLQAQRKPLSKVLSVKP 114

  Fly    79 -------------CFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWS 130
                         |||||||||||:..|...|......:....|:||:|||:||:|.||:.||||
 Frog   115 LPWALPMRHPKWRCFLYCNGLMDHLFVCQHATACSTWYRAPTYFNGTLDAFVKITRHEGLTSLWS 179

  Fly   131 GLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDI----PHPIPFLVPLLAGVSG 191
            ||.|||:.|:|:|||||..|:|.:              |.:.:.:    .|     :||:||...
 Frog   180 GLPPTLVMAVPATIIYFTCYDQLR--------------DFLCYGLGYHGSH-----IPLIAGALA 225

  Fly   192 RILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTC 256
            |:.|||.:||:|||||||||:::::.|:...:|..|...|.|.||:|..||:|||||||.:||..
 Frog   226 RLGAVTVISPLELIRTKMQSRQLSYMELGVCLRSAVSQDGWLSLWKGWGPTVLRDVPFSALYWFN 290

  Fly   257 YEYLKSSF----GVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQV 317
            ||.:|...    ..||..|..||:|||:||:|||.:|.|||||||..|||.|...:....  ||.
 Frog   291 YELVKKKMSNTKAAVESPFLVSFSAGAVSGAVAAVLTLPFDVVKTQRQIELGNLELGPSR--KQR 353

  Fly   318 ATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYN-IDQHN 376
            ::...|||  .|....|...:|:|..||:.||||||||||||:|:||:||...| |.|.|
 Frog   354 SSTWGAMR--RIRAESGTRGLFAGFLPRVIKVAPACAIMISSYEFGKNFFQQQNKIKQQN 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 66/136 (49%)
Mito_carr 178..265 CDD:395101 41/90 (46%)
Mito_carr 268..371 CDD:395101 52/102 (51%)
slc25a39XP_012827167.1 Mito_carr 69..206 CDD:395101 68/159 (43%)
Mito_carr 219..300 CDD:395101 40/80 (50%)
Mito_carr <326..401 CDD:395101 38/78 (49%)

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