DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a40

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001002360.1 Gene:slc25a40 / 436633 ZFINID:ZDB-GENE-040718-52 Length:353 Species:Danio rerio


Alignment Length:351 Identity:169/351 - (48%)
Similarity:222/351 - (63%) Gaps:28/351 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPA 101
            |.|.||:.::|:||::|:..:|||||:|.|||||:......|||:||||||||||.|  :..|..
Zfish    14 ITPFQQMMASCSGAIITSLLVTPLDVVKIRLQAQKNPFPKGKCFVYCNGLMDHICVC--ENGNTK 76

  Fly   102 AAKPAP-RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYT 165
            ....|| .||||:|||:||.|.|||.||||||.||||.|:|:|:|||..|:|.   |..:..|..
Zfish    77 VWYKAPGHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQL---FALLKLKMG 138

  Fly   166 RRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQ 230
            .|.|            |.||.||...|:.:.|.:||:|||||||||::.::.||...||..::::
Zfish   139 DRSD------------LAPLFAGAIARVGSATVISPLELIRTKMQSEKQSYREMSAVIRSALKNE 191

  Fly   231 GVLGLWRGLPPTILRDVPFSGIYWTCYE----YLKSSFGVVEPTFSFSFAAGAISGSVAATITTP 291
            |:..||||..||:|||||||.:||..||    :|...:...|||.:.:|.|||:|||:|:.||.|
Zfish   192 GLRSLWRGWGPTLLRDVPFSAMYWFNYEKGKWWLCKRYSCSEPTVAITFTAGALSGSIASIITLP 256

  Fly   292 FDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIM 356
            ||||||..|:|.||......:.....:|.||..|:.:   ..||..:|:|..|||.|||||||||
Zfish   257 FDVVKTKRQVEMGELQTMKLSTQVSSSTCSVMKRIVA---ENGVSGLFAGFMPRLIKVAPACAIM 318

  Fly   357 ISSFEYGKSFFYHYNIDQHNRSNQAT 382
            ||::|:||:||..||   |.:..|||
Zfish   319 ISTYEFGKAFFRKYN---HQKEGQAT 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 67/120 (56%)
Mito_carr 178..265 CDD:395101 41/90 (46%)
Mito_carr 268..371 CDD:395101 51/102 (50%)
slc25a40NP_001002360.1 Mito_carr 12..129 CDD:395101 66/116 (57%)
Solcar 1 14..132 68/122 (56%)
Solcar 2 140..224 42/95 (44%)
Mito_carr 143..229 CDD:395101 41/85 (48%)
Mito_carr 232..333 CDD:395101 51/103 (50%)
Solcar 3 234..328 48/96 (50%)

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