Protein Alignment Shawn and GC2

DIOPT Version :9

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_731657.2
• Gene: GC2 / 41449
• FlyBaseID: FBgn0037970
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 85/368 - (23%)
• Similarity: 147/368 - (39%)
• Gaps: 85/368 - (23%)

  Fly    34 RFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTP 98
            :|.:.| :.:.....|.:..|| :.|||::|||||.|                     ..||:..
  Fly    17 KFNVFP-KIINGGVAGIIGVAC-VYPLDMVKTRLQNQ---------------------TIGPNGE 58

  Fly    99 NPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYK 163
            .        .::...|.|.|...:||...::.|.:..::...|...|...|.:.|:..
  Fly    59 R--------MYTSIADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYH------- 108

  Fly   164 YTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQ-SQRMTHAE--------- 218
                   :|.| ...||.....|||....:..:...:|:||::.:|| :.|:..|:
  Fly   109 -------LASD-DGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKT 165

  Fly   219 --MFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYL-----KSSFGVVEPTFSFSFA 276
              ..|..:.:::.:|:.||::|:..|.:||:.||.:|:....::     :.|.|..|..|.:|..
  Fly   166 ITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLI 230

  Fly   277 AGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSG 341
            ||.:||..:|.:.||||||||..|.:..:||            |.:...:....:..|:.|.|.|
  Fly   231 AGLLSGMTSAFMVTPFDVVKTRLQADGEKKF------------KGIMDCVNRTLKEEGISAFFKG 283

  Fly   342 LGPRLFKVAPACAIMISSFEYG-KSFFYHYNIDQHNRSNQATK 383
                     ..|.||:.:..:| ...||...:.:.....:.||
  Fly   284 ---------GLCRIMVLAPLFGIAQMFYFLGVGEKILGIERTK 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	25/119 (21%)
		Mito_carr	178..265	CDD:278578	24/103 (23%)
		Mito_carr	268..371	CDD:278578	30/103 (29%)
GC2	NP_731657.2	PTZ00169	14..289	CDD:240302	78/338 (23%)
		Mito_carr	16..106	CDD:278578	25/119 (21%)
		Mito_carr	123..203	CDD:278578	20/79 (25%)
		Mito_carr	228..302	CDD:278578	26/94 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441492
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840