Protein Alignment Shawn and GC2

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_731657.2
• Gene: GC2 / 41449
• FlyBaseID: FBgn0037970
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 85/368 - (23%)
• Similarity: 147/368 - (39%)
• Gaps: 85/368 - (23%)

  Fly    34 RFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTP 98
            :|.:.| :.:.....|.:..|| :.|||::|||||.|                     ..||:..
  Fly    17 KFNVFP-KIINGGVAGIIGVAC-VYPLDMVKTRLQNQ---------------------TIGPNGE 58

  Fly    99 NPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYK 163
            .        .::...|.|.|...:||...::.|.:..::...|...|...|.:.|:..
  Fly    59 R--------MYTSIADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYH------- 108

  Fly   164 YTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQ-SQRMTHAE--------- 218
                   :|.| ...||.....|||....:..:...:|:||::.:|| :.|:..|:
  Fly   109 -------LASD-DGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKT 165

  Fly   219 --MFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYL-----KSSFGVVEPTFSFSFA 276
              ..|..:.:::.:|:.||::|:..|.:||:.||.:|:....::     :.|.|..|..|.:|..
  Fly   166 ITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLI 230

  Fly   277 AGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSG 341
            ||.:||..:|.:.||||||||..|.:..:||            |.:...:....:..|:.|.|.|
  Fly   231 AGLLSGMTSAFMVTPFDVVKTRLQADGEKKF------------KGIMDCVNRTLKEEGISAFFKG 283

  Fly   342 LGPRLFKVAPACAIMISSFEYG-KSFFYHYNIDQHNRSNQATK 383
                     ..|.||:.:..:| ...||...:.:.....:.||
  Fly   284 ---------GLCRIMVLAPLFGIAQMFYFLGVGEKILGIERTK 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	25/119 (21%)
		Mito_carr	178..265	CDD:395101	24/103 (23%)
		Mito_carr	268..371	CDD:395101	30/103 (29%)
GC2	NP_731657.2	Mito_carr	16..106	CDD:395101	25/119 (21%)
		Mito_carr	123..203	CDD:395101	20/79 (25%)
		Mito_carr	228..302	CDD:395101	26/94 (28%)