Protein Alignment Shawn and GC1

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_650134.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 365
• Identity: 90/365 - (24%)
• Similarity: 144/365 - (39%)
• Gaps: 84/365 - (23%)

  Fly    26 SKATMTDP-------RFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYC 83
            |.||:..|       :|.:.| :.:.....|.:...| :.|||::|||||.||
  Fly     3 SSATIATPLPQPQHQQFALLP-KIINGGIAGIIGVTC-VFPLDLVKTRLQNQQ------------ 53

  Fly    84 NGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFV 148
                     .||:...        .::...|.|.|..:.||...::.|....::...|...|...
  Fly    54 ---------IGPNGER--------MYNSMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLT 101

  Fly   149 AYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQ--S 211
            |.:.|:.:.|....|               :|....::||.......:...:|:||::.:||  .
  Fly   102 ANDYFRHKLTTKDGK---------------LPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAG 151

  Fly   212 QRMTHAEMFG-TIR---------QVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYL-----K 261
            :....|::.| |:.         |:::.:|:.||::|:..|.||||.||.||:..:..|     :
  Fly   152 RVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPR 216

  Fly   262 SSFGVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQI---EFGEKFIFSDNPPKQVATKSVA 323
            .:.|..|..|..||.||..:||.||....|||||||..|.   ..|||           ..|.::
  Fly   217 RNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEK-----------EFKGIS 270

  Fly   324 MRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYG 363
            ..:....:..|..|.|.|...|:..:||...|..:.:..|
  Fly   271 DCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLG 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	25/119 (21%)
		Mito_carr	178..265	CDD:395101	26/103 (25%)
		Mito_carr	268..371	CDD:395101	31/99 (31%)
GC1	NP_650134.1	PTZ00169	37..294	CDD:240302	79/312 (25%)