Protein Alignment Shawn and CG16736

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_649873.1
• Gene: CG16736 / 41101
• FlyBaseID: FBgn0037668
• Length: 277
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 52/308 - (16%)
• Similarity: 86/308 - (27%)
• Gaps: 144/308 - (46%)

  Fly   179 IPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEM------------------FGTI-- 223
            :|..|.||...:.::|:    .|:||:|..||:..:.|:.:                  :|.:
  Fly     1 MPVYVGLLIKTTAQLLS----HPMELVRVNMQANVIHHSRLSINHMFRLMARHGLPGFYYGIVAA 61

  Fly   224 ---------------------RQVVQSQ--------GVLGLWRGLPPTILRDVPFSGI------- 252
                                 :.|:..|        |:.|.|.|:..|     ||:.:
  Fly    62 CLRCTVHTMSTYTLFYNLQDNKYVLMLQPYNTSMVLGITGFWGGVLAT-----PFAKLAVIRQAD 121

  Fly   253 -------------YW---TCYEYLKSSFGVV---------------------------------- 267
                         :|   .|. |.|..|..:
  Fly   122 LTRGSYERRNYRNFWRGLKCM-YAKGGFTYLFTGWKINSISSTAVAVLYTPISDKVHTVISWFHR 185

  Fly   268 --EPTFSFSFAAGAISGSVAATITTPFDVVKT---HEQIEFGEKFIFSDNPPKQVATKSVAMRLA 327
              ||..| .....|::||:...|.||.|.:.|   :|...:|.              .|......
  Fly   186 LDEPWLS-DLITMALTGSIITVIMTPVDALATLTLNESSHYGR--------------TSYPYLYR 235

  Fly   328 SIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQH 375
            .|.|..|....|.|..|.|..:.|...:        .:|.|.:.:|::
  Fly   236 KIIRKHGYKGFFFGWKPALMALIPHTVL--------ATFVYRFLLDRY 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101
		Mito_carr	178..265	CDD:395101	26/157 (17%)
		Mito_carr	268..371	CDD:395101	24/105 (23%)
CG16736	NP_649873.1	Mito_carr	6..81	CDD:395101	11/78 (14%)
		Mito_carr	187..277	CDD:395101	25/112 (22%)