DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawn and slc25a55a

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_998573.1 Gene:slc25a55a / 406717 ZFINID:ZDB-GENE-040426-2745 Length:329 Species:Danio rerio


Alignment Length:359 Identity:83/359 - (23%)
Similarity:131/359 - (36%) Gaps:101/359 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAA 103
            |.:.:.....|.:...| :.|:|:.|||||.|:|                     |...      
Zfish     8 PAKLINGGIAGIVGVTC-VFPIDLAKTRLQNQRQ---------------------GQQV------ 44

  Fly   104 KPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRP 168
                 :...||..||..||||...::.|.:..|....|...|...|.:.|:.     |.....|.
Zfish    45 -----YKSMIDCLIKTVRTEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRC-----HLSRNGRG 99

  Fly   169 DTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQ----------------------- 210
            ..:..:          :|||.:..:..|...:|:|:::.::|                       
Zfish   100 LNVFKE----------MLAGCAAGMCQVIVTTPMEMLKIQLQDAGRLAAQQRKPGLIPPTRLAAN 154

  Fly   211 -------------SQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKS 262
                         |.|...|....  |:::.:||:.||::||..|:|||||||.:|:..:..| :
Zfish   155 TVLCRSYNVVPNSSARAVSATQIA--RELLHTQGIQGLYKGLGATLLRDVPFSIVYFPLFANL-N 216

  Fly   263 SFGVVEP----TFSFSFAAGAISGSVAATITTPFDVVKTH-EQIEFGEKFIFSDNPPKQVATKSV 322
            ..|...|    .|.:||.:|.::||.||....|.|||||. :.:..|         ..:.....:
Zfish   217 KLGKPSPDEAAPFYWSFISGCVAGSTAAVAVNPCDVVKTRLQSLSKG---------ANEDTYSGI 272

  Fly   323 AMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIM 356
            ....:.|.|..|..|...|.|.|...:||...|:
Zfish   273 VDCFSKIMRREGPSAFLKGAGCRALVIAPLFGIV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 27/119 (23%)
Mito_carr 178..265 CDD:395101 27/122 (22%)
Mito_carr 268..371 CDD:395101 26/94 (28%)
slc25a55aNP_998573.1 PTZ00169 1..292 CDD:240302 77/343 (22%)
Mito_carr 3..97 CDD:395101 28/126 (22%)

Return to query results.
Submit another query.