DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a25a

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_998422.1 Gene:slc25a25a / 406541 ZFINID:ZDB-GENE-040426-2396 Length:469 Species:Danio rerio


Alignment Length:330 Identity:72/330 - (21%)
Similarity:132/330 - (40%) Gaps:65/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            |:....||:...| ..|||.:|..:|...           |.|  ..:|                
Zfish   191 VSGGGAGAVSRTC-TAPLDRLKVLMQVHG-----------CQG--KSMC---------------- 225

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
                .:....::.:..|:.|||.|....:|...|.|.:.|:||||.|           |...:..
Zfish   226 ----LMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIK-----------RVMGSSQ 275

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRM-THAEMFGTIRQVVQSQGVLGLW 236
            ..:.....|:...||||    :|.:.:.|:|:::|::..::. .:..:....:.:::::|:...:
Zfish   276 ETLGISERFVAGSLAGV----IAQSTIYPMEVLKTRLALRKTGQYKGISDCAKHILKTEGMSAFY 336

  Fly   237 RGLPPTILRDVPFSGIYWTCYEYLKSS----FGV--VEPTFSFSFAAGAISGSVAATITTPFDVV 295
            :|..|.:|..:|::||....||.||::    :|.  .:|......|.|.:|.:.....:.|..::
Zfish   337 KGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALI 401

  Fly   296 KTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSF 360
            :|..|.:      .|.....||   |:......|.:..|...::.||.|...||.||.:|....:
Zfish   402 RTRMQAQ------ASVEGSSQV---SMTGLFKQIMKTEGPTGLYRGLTPNFLKVIPAVSISYVVY 457

  Fly   361 EYGKS 365
            |:.||
Zfish   458 EHIKS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 26/115 (23%)
Mito_carr 178..265 CDD:395101 20/91 (22%)
Mito_carr 268..371 CDD:395101 24/98 (24%)
slc25a25aNP_998422.1 FRQ1 40..141 CDD:444056
Solcar 1 184..270 26/123 (21%)
PTZ00169 191..445 CDD:240302 64/311 (21%)
Solcar 2 278..363 20/88 (23%)
Solcar 3 375..463 24/97 (25%)
Blue background indicates that the domain is not in the aligned region.

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