DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a30

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001165746.1 Gene:slc25a30 / 394840 XenbaseID:XB-GENE-995074 Length:291 Species:Xenopus tropicalis


Alignment Length:320 Identity:73/320 - (22%)
Similarity:126/320 - (39%) Gaps:58/320 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AMVTA-CFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTI 113
            |.:|| |...|:|:.|||||.|.||                         |.|..|.. |:.|.:
 Frog    15 ASITAECGTFPIDLTKTRLQVQGQA-------------------------NDAKYKEI-RYRGML 53

  Fly   114 DAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHP 178
            .|.::|.:.||:.:|:||::|.::.......|....|:..|..|.               |.|..
 Frog    54 HAIVRIWKEEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFV---------------DCPED 103

  Fly   179 IPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ-RMTHAEMFGTIRQVVQSQGVLGLWRGLPPT 242
            ...::.:..||...:::....:|.::::.:||:| .:....|.|....:.|.:|..|||:|:..|
 Frog   104 ETLVINVFCGVLSGVVSSCIANPTDVLKIRMQAQGSLIQGGMIGNFINIYQQEGTRGLWKGVSLT 168

  Fly   243 ILRDVPFSGIYWTCYEYLKSSF---GVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFG 304
            ..|.....|:....|:..|...   |::..|....|.|....|...|..:.|.|||:|.      
 Frog   169 AQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTR------ 227

  Fly   305 EKFIFSDNPPKQVATKSVAMRLASI---YRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
               :.:....:.|:..|....|..:   ::..|..|::.|..|...::.|...|...::|
 Frog   228 ---MMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 31/109 (28%)
Mito_carr 178..265 CDD:395101 19/90 (21%)
Mito_carr 268..371 CDD:395101 20/97 (21%)
slc25a30NP_001165746.1 Solcar 1 7..96 30/106 (28%)
PTZ00169 9..289 CDD:240302 73/320 (23%)
Solcar 2 104..189 19/84 (23%)
Solcar 3 198..289 20/96 (21%)

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