DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a20

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_989099.1 Gene:slc25a20 / 394703 XenbaseID:XB-GENE-971451 Length:301 Species:Xenopus tropicalis


Alignment Length:341 Identity:82/341 - (24%)
Similarity:137/341 - (40%) Gaps:65/341 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RPLQQVASACTGAMVTACFM---TPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPN 99
            :|:..:.:...|.....|.:   .|||.||.|:|.|                           |.
 Frog     6 QPISPMKNFFAGGFGGICLVFAGHPLDTIKVRIQTQ---------------------------PK 43

  Fly   100 PAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKY 164
            |....| |.:|||.|.|.|....||:..|:.|::..:|...|...:.|..:...|    .:..|:
 Frog    44 PVPGIP-PLYSGTFDCFKKTLVNEGLRGLYKGMAAPIIGVTPMFAVCFFGFGLGK----KLQQKH 103

  Fly   165 TRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ----RMTHAEMFGTIRQ 225
               |:.|   :.:|..|...:|:||    .....::|.|.|:..:|.|    .:.:|......:|
 Frog   104 ---PEDI---LTYPQLFAAGMLSGV----FTTAIMAPGERIKCLLQIQAASGEVKYAGPMDCAKQ 158

  Fly   226 VVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKS-----SFGVVEPTFSFSFAAGAISGSVA 285
            :.:..|:.|:::|...|::||||.||:|:..||:||:     ...|.|.:......||.::|...
 Frog   159 LYREAGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNILTPEGHSVSELSVPKILFAGGMAGIFN 223

  Fly   286 ATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVA 350
            ..:..|.||:|:..|.....|:   .|..:.|        |..:.|..|:.:::.|....:.:..
 Frog   224 WAVAIPPDVLKSRFQTAPAGKY---PNGFRDV--------LRELIREEGIGSLYKGFTAVMLRAF 277

  Fly   351 PACAIMISSFEYGKSF 366
            ||.|.....||....|
 Frog   278 PANAACFLGFEVAMKF 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 29/122 (24%)
Mito_carr 178..265 CDD:395101 27/95 (28%)
Mito_carr 268..371 CDD:395101 22/99 (22%)
slc25a20NP_989099.1 Mito_carr 6..103 CDD:395101 29/128 (23%)
Mito_carr 108..198 CDD:395101 27/93 (29%)
Mito_carr 205..294 CDD:395101 22/100 (22%)

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