Protein Alignment Shawn and SCaMC

DIOPT Version :9

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_729802.1
• Gene: SCaMC / 39415
• FlyBaseID: FBgn0052103
• Length: 583
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 80/335 - (23%)
• Similarity: 130/335 - (38%)
• Gaps: 66/335 - (19%)

  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            ||....||:...| ..|||.||..||.|.|.:..::|.        ||
  Fly   290 VAGGIAGAVSRTC-TAPLDRIKVYLQVQTQRMGISECM--------HI----------------- 328

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
                       :....|..|:|.|....::...|.|...|.||||.|...         |.|
  Fly   329 -----------MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLI---------RGD--- 370

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRM-THAEMFGTIRQVVQSQGVLGLW 236
             |....:..:....||.:...::.|.:.|:|:::|::..:|. .:|.:.....::.:.:||...:
  Fly   371 -DGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFY 434

  Fly   237 RGLPPTILRDVPFSGIYWTCYEYLKSSF-----GVVEPTFSFSFAAGAISGSVAATITTPFDVVK 296
            ||..|.||..:|::||....||.||..:     ...:|:|....|.|:.|.::....:.|..:|:
  Fly   435 RGYVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVR 499

  Fly   297 THEQIEFGEKFIFSDNPPKQVATKS---------VAMRLASIYRMGGVPAIFSGLGPRLFKVAPA 352
            |..|.:..|. |.:.....|:..||         :......|.|..|:..::.|:.|...||.||
  Fly   500 TRLQAQAAET-IANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPA 563

  Fly   353 CAIMISSFEY 362
            .:|....:||
  Fly   564 VSISYVVYEY 573

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	29/115 (25%)
		Mito_carr	178..265	CDD:278578	22/92 (24%)
		Mito_carr	268..371	CDD:278578	26/104 (25%)
SCaMC	NP_729802.1	FRQ1	100..247	CDD:227455
		EFh	116..176	CDD:238008
		EFh	186..242	CDD:238008
		Mito_carr	285..370	CDD:278578	30/125 (24%)
		Mito_carr	375..463	CDD:278578	22/87 (25%)
		Mito_carr	470..581	CDD:278578	26/105 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441512
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840