DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a20

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_957153.1 Gene:slc25a20 / 393833 ZFINID:ZDB-GENE-040426-1869 Length:300 Species:Danio rerio


Alignment Length:346 Identity:84/346 - (24%)
Similarity:139/346 - (40%) Gaps:75/346 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RPLQQVASACTGAMVTACFM---TPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPN 99
            :|:..:.:...|.....|.:   .|||.||.|||.|                           |.
Zfish     5 QPISPMKNFFAGGFGGVCLVFAGHPLDTIKVRLQTQ---------------------------PK 42

  Fly   100 PAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKY 164
            |...:.| :::||.|.|.|....||:..|:.|::..:|...|...:.|..:...|.       ..
Zfish    43 PRPGEVA-QYAGTFDCFKKTLAKEGVRGLYKGMAAPIIGVTPMFAVCFFGFGLGKK-------LQ 99

  Fly   165 TRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ----RMTHAEMFGTIRQ 225
            .:.||.|   :.:|..|...:|:||    .....::|.|.|:..:|.|    ::.:|.....::|
Zfish   100 QKTPDDI---LTYPQLFAAGMLSGV----FTTAIMAPGERIKCLLQIQAASGQVKYAGPMDCVKQ 157

  Fly   226 VVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLK----------SSFGVVEPTFSFSFAAGAI 280
            :.:..|:.|:::|...|::||||.||:|:..||:||          |...|  |:..|   ||.:
Zfish   158 LYRESGIRGIYKGTALTLMRDVPASGMYFMTYEWLKHALTPEGKSPSELSV--PSILF---AGGM 217

  Fly   281 SGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPR 345
            :|.....:..|.||:|:..|.....|:   .|..:.|        |..:.|..||.:::.|....
Zfish   218 AGIFNWAVAIPPDVLKSRFQTAPEGKY---PNGFRDV--------LRELVREEGVRSLYKGFNAV 271

  Fly   346 LFKVAPACAIMISSFEYGKSF 366
            :.:..||.|.....||....|
Zfish   272 MLRAFPANAACFLGFEVAMKF 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 28/122 (23%)
Mito_carr 178..265 CDD:395101 28/100 (28%)
Mito_carr 268..371 CDD:395101 24/99 (24%)
slc25a20NP_957153.1 Mito_carr 5..101 CDD:395101 28/130 (22%)
Mito_carr 107..197 CDD:395101 27/93 (29%)
Mito_carr 204..293 CDD:395101 26/105 (25%)

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