DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a1a

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_956901.1 Gene:slc25a1a / 393579 ZFINID:ZDB-GENE-040426-1172 Length:359 Species:Danio rerio


Alignment Length:367 Identity:88/367 - (23%)
Similarity:135/367 - (36%) Gaps:89/367 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GQFAAASAAMAAASSQNPSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQ 72
            ||...|:||:......:|.||..             |....|. :..|...|.:.:||:||..::
Zfish    56 GQRTLAAAAIGGRKITHPWKAIF-------------AGGIAGG-IEICITFPTEYVKTQLQLDER 106

  Fly    73 ALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLI 137
            |                         ||      ||:.|..|......:..|:..|:.|||..|.
Zfish   107 A-------------------------NP------PRYRGIGDCVKLTVQYHGLRGLYRGLSSLLY 140

  Fly   138 SALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRIL-AVTCVSP 201
            .::|.:.:.|..:|.......|.    |.|.|..|           .||.|:...|. ||..|.|
Zfish   141 GSIPKSAVRFGTFEVLSNPMRDA----TGRLDNKA-----------SLLCGLGAGIAEAVLVVCP 190

  Fly   202 VELIRTK----MQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKS 262
            :|.::.|    ..|.|..:...|..:|::::.|||.|.::||..|:|:......|.:.....|::
Zfish   191 METVKVKFIHDQCSLRPRYRGFFHGVREIIRDQGVRGTYQGLTATLLKQGSNQAIRFYVMNLLRN 255

  Fly   263 SFGVVEP--------TFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVAT 319
            .:...:|        |..|    ||.:|:.:....||.|||||..|.....::            
Zfish   256 WYKGDDPARDMHPLVTAMF----GATAGAASVFGNTPLDVVKTRMQGLEAHRY------------ 304

  Fly   320 KSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            ||.......|.:..|..|.:.|..|||.:|....||:...:|
Zfish   305 KSTMDCAFQILKNEGPLAFYKGTVPRLGRVCLDVAIVFVLYE 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 24/119 (20%)
Mito_carr 178..265 CDD:395101 24/91 (26%)
Mito_carr 268..371 CDD:395101 27/102 (26%)
slc25a1aNP_956901.1 Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 71..159 27/132 (20%)
Mito_carr 72..156 CDD:395101 27/128 (21%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 170..256 25/96 (26%)
Mito_carr 171..260 CDD:395101 25/99 (25%)
Mito_carr 265..354 CDD:395101 26/98 (27%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 266..351 26/97 (27%)

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