DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a39

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_956780.1 Gene:slc25a39 / 393458 ZFINID:ZDB-GENE-040426-1250 Length:359 Species:Danio rerio


Alignment Length:371 Identity:157/371 - (42%)
Similarity:224/371 - (60%) Gaps:62/371 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQ----QALLSN-------------KCFLYCN 84
            |.|:||:.::.|||::|:.|:|||||:|.||||||    ||:.:.             |||||||
Zfish    13 ITPVQQMLASGTGAVLTSLFVTPLDVVKIRLQAQQTPLFQAIAAESRPWFRVTRPSKWKCFLYCN 77

  Fly    85 GLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVA 149
            |||||:..|...:......|.:..||||:|||:||:..||:.||||||.|||:.|:|:|:|||..
Zfish    78 GLMDHVYVCQNMSSCSNLYKTSTHFSGTLDAFVKITHNEGLRSLWSGLPPTLVMAVPATVIYFTC 142

  Fly   150 YEQFKARFTDIHYKYTRRPDTIAHDI----PHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQ 210
            |:|.:              |.:.:.:    .|     :||:||...|:.||:.:||:||:|||||
Zfish   143 YDQLR--------------DFLCYSMGYHGDH-----IPLIAGGLARLGAVSVISPLELVRTKMQ 188

  Fly   211 SQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSS----FGVVEPTF 271
            |:|:.::|:...||..|...|.|.||||..||:|||||||.:||..||.:|:.    :...:.:|
Zfish   189 SRRLQYSELMVCIRSSVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVKAQLCEHYRTPQASF 253

  Fly   272 SFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMR--------LAS 328
            :.||.|||:||::||.:|.|||||||..||:.||          ..|..:|:|:        :.:
Zfish   254 TISFTAGAVSGAIAAVLTLPFDVVKTRRQIQLGE----------MEALGAVSMKKPSSTWNMMRN 308

  Fly   329 IYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQ 374
            |:...|...:|:|..||:.|||||||:|||::|:||:||...|:.|
Zfish   309 IWIDMGYKGLFAGFLPRVIKVAPACAVMISTYEFGKTFFQERNLHQ 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 64/136 (47%)
Mito_carr 178..265 CDD:395101 42/90 (47%)
Mito_carr 268..371 CDD:395101 46/110 (42%)
slc25a39NP_956780.1 Mito_carr 13..150 CDD:395101 66/150 (44%)
Solcar 1 13..149 65/149 (44%)
Solcar 2 157..241 43/88 (49%)
Mito_carr 163..246 CDD:395101 41/82 (50%)
Mito_carr 250..351 CDD:395101 46/110 (42%)
Solcar 3 251..346 44/104 (42%)

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